YALI0F07623g

Overview

Description similar to uniprot|Q5A4P0 Candida albicans CaO19.10905 Potential formamidopyrimidine-DNA glycosylase
Locus type CDS
Locus tag YALI0F07623g

Location

Species Yarrowia lipolytica Positions 1095700..1097134
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1435 (nuc.)
Previous locus YALI0F07601g Next locus YALI0F07645g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F07623g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F07623gYALI0F07623g_mRNA-001YALI0F07623g_CDS-001

Nucleotide sequence

 

>YALI0F07623g
ATGCCCGAACTAGGAGAGGTGAGTACCCGCGACAGACACCCACAACCGCAGCTCTGAAAG
TGGTCGATGCTAACTCAGGTGGCGCACGCCGCGTCGGTGTTTGCGAAATTTGCAACCGGC
AAAAAAGTCGCCGAGGCGGATGTCCAGCCCGACAAGATCGTCTTTGGTAGTGAAACCGGC
CACGAGGCGCTGCAGAAGGCCCTCCAGGGCCGCGTCATCACTAACGTGTCGCGCCACGGT
AAGTACTGGTGGCTCACGCTCGATGGAGACGCCGATAACGCCGTATTGCTACACTTTGGC
ATGACGGGCTACATATCCGTCAAGGGCCACAGAACGCACTACATCATGATGGAGAACGGT
GGCGACAAAAAGGCACGTGATCGGCTCGACCGCATCCGTGGAGATGGAGGAGTCGTCGAA
GAAAAGGCCGCCAACGGTCAGTCCATCATTGCTGCCAATGGGGGCGACATTCCCGAAGAC
GTGTCCATGCTGGAGGAGCTGGCGGAGGAGGAACTCGAACAGCAGACGTGGCCGCCGCGG
TTCGTCAAGATGGATCTGACGCTCGAGGACGGTACCAAACTCGCGTTCTACGACGCTAGA
CGGCTAGCTAGGGTCAAGCTCTTTACGATCGCCGAACCTCTCGACATCTATAAGGTGGAT
CCGATGAAGAAACTGGGTCCGGATTACAGCAAGAGCCCAGACGACGAACACACACCGGCG
GCGCTCAAACCTCTGGATCTGGATGCTTTCAAGGCGAAAATCCAGGCGAAAAAGGCGCCC
ATCAAGTCCGTGCTTCTGGACCAATCACTTTTTTCGGGCGTAGGAAACTGGGTGGCCGAC
GAGATTCTCTACCACTCACGCGTGCACCCCGCTCGCATGTGCAATCTGCTGCTAGAGTCG
CAGATCGACGAGCTATACACCCAGCTCGTGCACATTTGCCAGTTTGTCGTCAAGGTGGAG
GGCAACACGTTGCTCTTTCCGCTCAACTGGCTTATGCTGAACCGATGGGGCAAGCGGAAC
AAGAACAAAAAGAGTTACACACTGGAGGGCTACGAGGTGGATCACGTGACTGTCGGAGGC
CGGACGTCATCCTTCTGTCCTGAACTACAACATAATGGACCTCCCAAAGAGAAGACTACC
ACTAAGCGGGTAAAGTTTGATGGAATCAAGACAGACGACGAAGAAGAGCAACCAAAGGAG
CTCACCAGGACGGTAAAGGAAGAGGGAGAGGAGGCCGAGGCGGAAGAAACGACACAGACC
AAGCCCAAAAAGCGACGTAAGAAGGTCAAGGTGGAGGAGGACCTGCTACCTCTGGTGGAC
GCGGTGGAGGCAAAGGACAAGTCGATACTGGATGCCCAAGCGAATAGTCGAGCTGAGCGG
GCCAAGCGACGACGGTCTTAATGTAAACTATGTATACTAATGTATTATATGTATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F07623g_CDS-001

Protein length: 447 aa.
Product: Formamidopyrimidine-DNA glycosylase, putative

>YALI0F07623g_CDS-001 MPELGEVAHAASVFAKFATGKKVAEADVQPDKIVFGSETGHEALQKALQGRVITNVSRHG
KYWWLTLDGDADNAVLLHFGMTGYISVKGHRTHYIMMENGGDKKARDRLDRIRGDGGVVE
EKAANGQSIIAANGGDIPEDVSMLEELAEEELEQQTWPPRFVKMDLTLEDGTKLAFYDAR
RLARVKLFTIAEPLDIYKVDPMKKLGPDYSKSPDDEHTPAALKPLDLDAFKAKIQAKKAP
IKSVLLDQSLFSGVGNWVADEILYHSRVHPARMCNLLLESQIDELYTQLVHICQFVVKVE
GNTLLFPLNWLMLNRWGKRNKNKKSYTLEGYEVDHVTVGGRTSSFCPELQHNGPPKEKTT
TKRVKFDGIKTDDEEEQPKELTRTVKEEGEEAEAEETTQTKPKKRRKKVKVEEDLLPLVD
AVEAKDKSILDAQANSRAERAKRRRS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG