YALI0F07601g

Overview

Description similar to uniprot|O13728 Schizosaccharomyces pombe SPAC15A10.08
Locus type CDS
Locus tag YALI0F07601g

Location

Species Yarrowia lipolytica Positions 1093737..1095639
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1903 (nuc.)
Previous locus YALI0F07579g Next locus YALI0F07623g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F07601g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F07601gYALI0F07601g_mRNA-001YALI0F07601g_CDS-001

Nucleotide sequence

 

>YALI0F07601g
ATGTCTCTCCCTCAATGGATAGCGACGCAGCACAAGGCCTTTTTGCGATGGGCAAACACG
TACTTAGAGGCCAACCAGATTGGCACCATGGTCTCGTTGGAGACGGACTTTTGCGACGGT
GTTCGGTTGTGCCAGCTCATTGAAATCATAGGAAAGGAGTCGCTGGGACGGTACAGTGGC
CAGCCCCGGATGCGGTTCCAAATGATCGAAAACGTCAACACCGCTCTGGCCTTCATTCGA
CACAGAGGAGTCCAGCTGCACAATATCGGCGCCGAGGACATTTGTGACGGCAATCTCAAG
CTGATTCTGGGCCTGCTGTGGATCCTTATTCTTCGTTTTACCATTGAAGATATCTCCGAG
GAGGGTCTCAGTGCCAAGGAAGGCCTGCTGTTATGGTGTCAGCGCAAAACCGCAGGATAC
AAGGGGGTGGCAGTCAAAGACTTTAGCGGCAGTTGGAGTGACGGCCTCGCTTTTTGCGCC
CTGTTGGACAAACATCGACCTGATCTCATTGACTTCGCACAGCTAGACCCTACCAAGCCT
CGAGAAAACATGGAGTTGGCTATTAGCATTGCTACAGAGCAGATTGGAATCCCACAGATT
CTTGATGTCGAAGACATCTGTGGTGTGGCTAAACCAGACGAGCGGTCTGTCATGACATAT
GTGGCCTACTGGTTCCATGCCTTTTCTGCTCTGGACATGATTGAGAACGCGGGAAGACGG
TTAGAGAAGTTTGTTGAAATGACCTCGTCGGCCTATGCCATGCAGTCGGGCTACGAAGAA
CGTATGAAAGCGCTTCTCAAGGCGATAGCCACTCAAAAGGAGAAGTGGGAACAGGCAGCT
GACCCAGAGCATTTGGCCTACGTTGAGGTCAAACAACAAACTGCAGAACACGCAACTTTC
AAAATCAAGACGAAGCGGGAATGGACCAGGGAAAAGGCCTCGCTGGCCTCGCTGCTGGGA
AACATTCGCACAAAACTGGCCACCTACAACCTCAAAGAGTACTCTCCTCCCGTTGGTCTG
AGATCAGCGGACGTAGAAGCAGCATGGAAAGAGCTCCACATGGGAGAAATCAACCGATCA
AAGCTTCTGAATCAGAGTATGAGACGACTCAAGGAAAGTTTACGTAAACGGTTTGCTGAT
GCCGCCAACGAGTTTTCAGATAGACTGTCGGTGCTGTCAACTGCTATTAGCCAGATGGAC
GGACCTCTGGAAGACCAACTGGAGGAGATTGCGGATATCAGTGAAAAGCTGCGTCCTCTG
ACCGAGAAAATACGACTTCTCAAGGAATTGGACACCAGCTGCGTGGAGGCCAACGTCGAA
GAAAACGACTACACAGTGTACTCGTATGACGAGCTGGAATACGATCTGGGGCTGGCCAAG
GAATCGGTCAAGAAGAAACTTGCATTTATCGAGAACCAGATTGTGGCTCGAAACATGACC
AACCTGACGCCTATCCAGCTGGAGGAGTTTGAGTCTGTCTTCCGACACTTTGACAAGAGC
CAGCACAATGCTCTGTTGGAGTCCGAGTTCTCCGGAGCTCTGGCTTCTCTCGGCCTAGTG
TATTCCGAGACTGAGATGCACGAGGTGTTTCAGGCGGCCTCCGAGGGACAAGTTTCAGTG
TCGTTCGAGCAGTTCATTACTTTCATGGTCGAGGTGACCGAGGACCAACTGTCTGCCGAA
CAGGTGCTGCAATCGTTTGCCGAGGTGGCAGACGGCAAAATGTACGTGACGGAGCTGGAC
TTGCAAAACTCACTCATCCCAGAACCTATGATTGACCAACTCAAAGATACAATGCCCAAG
ACAGCCGACGGCTTTGATTACATTGCCTACATGGAGCGCTTGACCTTGTGATATCAAATA
TAAATAGACGTTAGCATAAACATTCATATCATTACTTGTATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F07601g_CDS-001

Protein length: 617 aa.
Product: Conserved hypothetical protein

>YALI0F07601g_CDS-001 MSLPQWIATQHKAFLRWANTYLEANQIGTMVSLETDFCDGVRLCQLIEIIGKESLGRYSG
QPRMRFQMIENVNTALAFIRHRGVQLHNIGAEDICDGNLKLILGLLWILILRFTIEDISE
EGLSAKEGLLLWCQRKTAGYKGVAVKDFSGSWSDGLAFCALLDKHRPDLIDFAQLDPTKP
RENMELAISIATEQIGIPQILDVEDICGVAKPDERSVMTYVAYWFHAFSALDMIENAGRR
LEKFVEMTSSAYAMQSGYEERMKALLKAIATQKEKWEQAADPEHLAYVEVKQQTAEHATF
KIKTKREWTREKASLASLLGNIRTKLATYNLKEYSPPVGLRSADVEAAWKELHMGEINRS
KLLNQSMRRLKESLRKRFADAANEFSDRLSVLSTAISQMDGPLEDQLEEIADISEKLRPL
TEKIRLLKELDTSCVEANVEENDYTVYSYDELEYDLGLAKESVKKKLAFIENQIVARNMT
NLTPIQLEEFESVFRHFDKSQHNALLESEFSGALASLGLVYSETEMHEVFQAASEGQVSV
SFEQFITFMVEVTEDQLSAEQVLQSFAEVADGKMYVTELDLQNSLIPEPMIDQLKDTMPK
TADGFDYIAYMERLTL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG