YALI0F07447g

Overview

Description weakly similar to uniprot|P53833 Saccharomyces cerevisiae YNL282w RNases MRP/P 22.6 kDa subunit (RNA processing protein POP3)
Locus type CDS
Locus tag YALI0F07447g

Location

Species Yarrowia lipolytica Positions 1075892..1076691
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 800 (nuc.)
Previous locus YALI0F07403r Next locus YALI0F07469g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F07447g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F07447gYALI0F07447g_mRNA-001YALI0F07447g_CDS-001

Nucleotide sequence

 

>YALI0F07447g
ATGTCAGTACTGGGGGAGGAAAAACGCAAAGCGGTGCTCAAACAGGTTCTGGAGGACCCT
TATCTTAAGGTTGCATGGCCCGAGGTCTCCGAGGACAAAAGGGAATCCATATTCAGTCTC
TTACAATCGGCGCTGGCACCCGTCAAACCATACCGAGAGTCTCAACGACAGGCTAAAGAC
ACAGGCGTTAAGCTGCCACCTACCCCAGGCGCTGTGGAGCAGTCGTCGCTGGGCTTCAAT
CCCGTCACAAAGGCACTGCAAAGCCAGGCCAAACAGAATCTGCTCAGTGAGCCTGTGAAG
GAACCGATCACCATGGTGTTCATTTGCAAGGACGACATCCAACCCGAGATTCTCGTCAAA
CACTTTCCTTCGCTTTGTGCAAGTGCAAGCAACACACAGACTGCTGTAAAGCTCGTTTCT
CTGCCAGCAGGCTCCATGGAGAAGTTGTCTGAAGTTACTGGACTTCGTGATCTAGGCTGT
GTGGCACTCAAGGCCCATAAGGACTTTGATACTTTGTCCAAGGTGATAATGGCTTCTGTG
CTTGACGTGGAATTGCCGTGGAAGTCCGAGAGTCCATTCACCCCTCTGGAAGTCAAGAGT
CTGACTACATTTGCACCCATTAAGAAAAGCAAGAACCAGCTGACCGCTGAAAAGAAGGGA
AAAGAGAACAACCAAAAGGAACAACAGCAGAAGCAGCAGAAACAAGGGAAACAGGGCAAT
GCGAAGCCCAAAGGAAAAGTCACCAAGCCTTAGTCATTCTGCAAGTACATTAATTTATAT
TGAATAAGTATCTAGCAAGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F07447g_CDS-001

Protein length: 251 aa.
Product: Conserved hypothetical protein

>YALI0F07447g_CDS-001 MSVLGEEKRKAVLKQVLEDPYLKVAWPEVSEDKRESIFSLLQSALAPVKPYRESQRQAKD
TGVKLPPTPGAVEQSSLGFNPVTKALQSQAKQNLLSEPVKEPITMVFICKDDIQPEILVK
HFPSLCASASNTQTAVKLVSLPAGSMEKLSEVTGLRDLGCVALKAHKDFDTLSKVIMASV
LDVELPWKSESPFTPLEVKSLTTFAPIKKSKNQLTAEKKGKENNQKEQQQKQQKQGKQGN
AKPKGKVTKP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG