YALI0F07260g - OCH1

Overview

Description uniprot|Q70MH4 Yarrowia lipolytica YALI0F07260g OCH1 Alpha 1,6 mannosyltransferase
Locus type CDS
Gene name OCH1
Locus tag YALI0F07260g

Location

Species Yarrowia lipolytica Positions 1061786..1063190
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1405 (nuc.)
Previous locus YALI0F07238g Next locus YALI0F07282g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F07260g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F07260gYALI0F07260g_mRNA-001YALI0F07260g_CDS-001

Nucleotide sequence

 

>YALI0F07260g
ATGGCTCTCATCACAGCTCGACGGGTGATTTTGCTGGGGCTCGCGGTCGCGACCGTGTGC
TTCCTGTTTTTCGGGTCCAGTGAAAAAATTGCCCCCACGGTGCTACTGCCCGGCGATATG
TCCGCTTTCGAAAACAAAATCTACAAGATGCGGGCGGAGACGGAAAAGGCGCTCAAGGAG
CAGGAGGCAGCCGCGGCCAAGCGGTTCGATTCGTTCAACAAGAAGCTCAGCGAGCTGGAG
ACCGAAAACCGGGTGCTGGAGAAGGAGATCCAACGTCTTCGAACTCCTCCCCAGGGAGCG
TCGCTCAGAGAAAAACTCGCATACACCTTCCCCTACGAGACGTACAAAAAGTTCCCTGCC
TTCATCTGGCAGACGTGGAAGGACGAGATCACCGACGACACGCCCGACACGATCCGACAG
CCGATCCGAACTTGGACGGAGAAGAACCCCAGCTTTGTCCACGAGGTGCTGACCGATGAC
GCAGCAGCAATGTTTGTACAGCACCTGTATGCTCAGATCCCTGAGGTGGTGGAGGCGTAC
AAGGCCATGCCTAAAAACATTCTGCGGGCCGACTTCTTCCGTTACCTGGTTCTGCTGGCT
CGGGGAGGTGTCTACTCCGATGTCGACACTGAGGACCTCAAGCCCATCCCCAACTGGATC
CCTGATGAGGTCTCCCCTTCCACTGTTGGTCTGATTGTCGGTATTGAGGCCGATCCCGAC
CGACCCGACTGGAAGGAGTGGTACGCTCGACGAATCCAGCTGTGCCAGTGGACAATCCAG
GCCAAACCCGGTCACCCCGTTCTGCGAGACATTGTGGCCCGAATCGTGGAGAAGACGCTG
GCCAAGAAGCGAAGTGGTACTCTGGAGATGGCTGGCGACAAGACCGATGGCAGCGAGATC
ATGGACTGGACCGGGCCCGGAGTGTGGACCGACTCTGTCTTCGACTACTTCAACGACCGA
AAGAAGTCGGGACTCAAGTCGCAGGTCGGCATCAAGGACTTTTTCAACCTCAAGACCCCC
AAGCACGTGTCGGACGTGTTGGTTCTGCCCGTGACGTCGTTCTCTCCCGGTGTCGACCAG
TTTGGCGCCAAAGATACAGACGACCCGCTGGCCTTTGTCAAGCATCTGTTTTCCGGTTCA
TGGAAGCCCGAGGACGAGAGAATGAACCAGAACCAGCCGCAGGTCAATCAGTAGCTAGCA
TAATAGATTTGGGAAGAGTGAGAGAGATTCGAGGGCAAAGGTCCGAGAGTCTCCAATCAA
CAGTAGGAGGAGAGGCGAGCCTGTGTTCCGACCGTGGGAACTTACAGAACTGTGCAAGAT
CAAGCCTCGATCAACTCAGTAATTCTTGCCCGGCATTGCGACTTACACATACAGTACATA
CAAGTATACAGAGTTCTTCCATATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F07260g_CDS-001

Protein length: 398 aa.
Product: Alpha 1,6 mannosyltransferase
Gene: OCH1

>YALI0F07260g_CDS-001 MALITARRVILLGLAVATVCFLFFGSSEKIAPTVLLPGDMSAFENKIYKMRAETEKALKE
QEAAAAKRFDSFNKKLSELETENRVLEKEIQRLRTPPQGASLREKLAYTFPYETYKKFPA
FIWQTWKDEITDDTPDTIRQPIRTWTEKNPSFVHEVLTDDAAAMFVQHLYAQIPEVVEAY
KAMPKNILRADFFRYLVLLARGGVYSDVDTEDLKPIPNWIPDEVSPSTVGLIVGIEADPD
RPDWKEWYARRIQLCQWTIQAKPGHPVLRDIVARIVEKTLAKKRSGTLEMAGDKTDGSEI
MDWTGPGVWTDSVFDYFNDRKKSGLKSQVGIKDFFNLKTPKHVSDVLVLPVTSFSPGVDQ
FGAKDTDDPLAFVKHLFSGSWKPEDERMNQNQPQVNQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG