YALI0F07282g

Overview

Description similar to uniprot|P22580 Saccharomyces cerevisiae YDR242w AMD2 amidase
Locus type CDS
Locus tag YALI0F07282g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 1064290..1065920
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1631 (nuc.)
Previous locus YALI0F07260g Next locus YALI0F07304t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F07282g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F07282gYALI0F07282g_mRNA-001YALI0F07282g_CDS-001

Nucleotide sequence

 

>YALI0F07282g
ATGGTTCTCACATTCGAAATTGCTAGAGAGAAGTTCCTCAAGATCAGAGACGATTCCATT
GCAGAGCTGGACAAAGTGTTTCCTCCACCCGAGGACTCGAGACATCATGAAGTTCCCGCA
AAGTTGCCCAAGAACTCCATCCCCGTGTTCCAGGAGATGCTGGCCCATGACGATGCAGCT
ATCATCAATTCGGACCCAATCGAGCTGCTCGATCAGCTTGCTAAGGCCAAGGTATCGGCT
GTGGCTGTCGCAGGAGCGTTCCTAAGAGCTGCTGTTATTGCCCAGACTCTCACAAACTGC
CTGACGGAGCTGCTTCCTCGAGAGGCACTGGAAACTGCTCAGAAACTTGATGACTATCTA
AAATCCACAGGAAAGCCCGTGGGTCCTCTACATGGACTTCCCGTGTCCGTCAAGGAGATG
GTGGGCTTCAAAGGCCGAACCTGCCACTTTTCCGTGTCTTCCAAGATCAACAACATCACT
CCGGACAATGCTATCATCCTTAAAGTACTCTACAAAGCCGGAGCTAACCCTTACTGTCGA
ATACCGGTCCCCAATTTCTCATGTCGCTGGAATCAGAGTCGCCTCTCCATGGAAAGACTT
ACAACCCCTATAACCGAGATCTCACGTCTGGAGGCTCATCCTCGGGTGAAGGAGCCATCG
TCGGTCTTGGAGCGTCTGTTTTGGGTCTCGGAACTGACATTGGAGGCTCAATTCGAGGTC
CAGCTGCTTGCTGTGGTGTCTATGGTCTTCGTCCGTCTGTAGGAAGAATTACAAACACGG
GCTGTGATTATGTTATGCATGGAGCAGACTCGATCAAGGCATGTATTGGGCCCTTGACTT
CATCTCCGAAGCTGCTGGAGTTATTCATGAAGGTCATGTCGGACGCAGAAGTCTGGAGAT
ACGACCCCTTCACTGAACGGTCTATGTGGAATCCAGCTCTATTTCAAAAGAAGAAGCTAA
GAGTGGGCTACTACGCTGACGACGGCTACGTTACTCCCCATCCCCCTGTCATTCGGGCTG
TCAACGAGTACCTTGATAAGATCAAAAAGTTGAGCTTCAAGCATGTCGAGATCGAACTGG
TTCCATTCACTCCTTACGACCCATCTGGAGCCGTCCATATCATCTCGTCGCTATACTTCC
CCGACGGAGGAAAAGAGCTCAAAGAAGAGCTGTCCAGTGTTGGAGAATCTCTTACTGAAA
TGAGCAAAATGGCTCTAAATAACCCCAGCGTCCAGCGATTCAACATCGAGGAGCTCTGGA
AAGCACACACTCAACGAGACACCTTCCGTTGGAACCTGATGCACGAGTGGACCAAGGCTG
GAATCGACATGCTCATCACCCCGGTTCTGCCGGGAGCTGCCTTCAAGTTTGGAACTTGCA
ACTACTGGGGATACACAGCGTACTGGAATCTGGCGGATTACACTTCCGTGTCAGTCCCTT
ACTCGTCTGTCAAGGCTTCCGACAAGCCTGTGGAGGACTTCAAGCCCCGAAACAAGCTAG
ATGCCGAATGGCAGGCGTTGTATTCTCCCGAGACGTATGAAGGAGCTCCTCTTTCTATCC
AGTTGATTGCTCCTCGAATGCAGGATGAGGTGGTTGTTGAGGCCTTAAAGTTGTTTTCCG
ATATCAATTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F07282g_CDS-001

Protein length: 541 aa.
Product: Amidase, putative

>YALI0F07282g_CDS-001 MVLTFEIAREKFLKIRDDSIAELDKVFPPPEDSRHHEVPAKLPKNSIPVFQEMLAHDDAA
IINSDPIELLDQLAKAKVSAVAVAGAFLRAAVIAQTLTNCLTELLPREALETAQKLDDYL
KSTGKPVGPLHGLPVSVKEMVGFKGRTCHFSVSSKINNITPDNAIILKVLYKAGANPYCR
IPVPMSLESESPLHGKTYNPYNRDLTSGGSSSGEGAIVGLGASVLGLGTDIGGSIRGPAA
CCGVYGLRPSVGRITNTGCDYVMHGADSIKACIGPLTSSPKLLELFMKVMSDAEVWRYDP
FTERSMWNPALFQKKKLRVGYYADDGYVTPHPPVIRAVNEYLDKIKKLSFKHVEIELVPF
TPYDPSGAVHIISSLYFPDGGKELKEELSSVGESLTEMSKMALNNPSVQRFNIEELWKAH
TQRDTFRWNLMHEWTKAGIDMLITPVLPGAAFKFGTCNYWGYTAYWNLADYTSVSVPYSS
VKASDKPVEDFKPRNKLDAEWQALYSPETYEGAPLSIQLIAPRMQDEVVVEALKLFSDIN
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG