YALI0F07062g

Overview

Description similar to uniprot|Q07824 Saccharomyces cerevisiae YLL028w TPO1 polyamine transport protein
Locus type CDS
Locus tag YALI0F07062g

Location

Species Yarrowia lipolytica Positions 1032343..1034119
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1777 (nuc.)
Previous locus YALI0F07040g Next locus YALI0F07084g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F07062g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F07062gYALI0F07062g_mRNA-001YALI0F07062g_CDS-001

Nucleotide sequence

 

>YALI0F07062g
ATGGATCTCGAAAAACAACACTACGACGAGTCCTCGGGCCAGTCTGAAGCAAACGATATT
ATGAACGACTCTGGCGACGAACAGAAGCAAGCAGCTGAGCCTGAGGTGCTACAGCGAGAC
GAGCACGATGCCGTTGCAAGTCTGGGTCCCGTTGATACTCGAGGCTCAGGCATGTCACAG
GAAGAGGCCCTCTCCCAGATCCTCTCACATCCTAGACACAGAGAAACAAACGCTCCTCTG
CCACCAATGGGCAACGGTAAGGAGTACCCACCGCTGCTGCCTTCTCGAGATGCCTACCTG
GTGGGCTTCGATGGTCCCAATGACCCTCTGCATCCATTTAACTGGCCTCTTCGACAAAAG
CTGATGATCTCGTGCGTGTTGGGCTTTTCGACTTTCGTCGTCACCTGGGGCTCGGCCGTG
TTTGCGCCCGCATCCCCTCACATTGCCAAACAGTATGGCGTCATCCAGGAAGTCACCACT
CTGGGTATCTCACTCTATGTTTTTGGTTTCGCGACAGGCCCCGTTGTGTGGGCTCCCCTG
TCCGAGCTGTTTGGTCGAAAGCTGCCCATTTGCATTTCCGCCTTCATGATCATGTGCTTC
ACCTTCGGAGTGGCTGCCGCCAAAGACCTCCAGACAATCATGCTGTGCCGATTCTTTGCA
TCTTGTACCGGTTCCGCTCCCTTGGTCGTGGTGGCTGCTGCCTTTGCTGATATCTACAAC
AACAAGCAGCGAGGTATCGCTGTGCTCATGTTTGCCTCTGTCGTCTTTATTGGCCCTATT
ATCGCTCCTGTGGTTGGAGGTTTCATTTCCGAGTCCTACCTCGGATGGAGATGGACCATG
TACATCACCGGAATCATGGCCGCTCTGGGCGCCATTCTAGCAGTTGCCTTTTACAAGGAG
TCATACCACCCAATGCTGCTGACACAGCGAGCCAAGGAGCTGCGAGAGCGAACCGGAAAC
TGGGGCATCTACGCTTCCCAGGAGGTTGTCGAGCTCGACCTACACGCCATCATCTCTCAG
AACCTGGTGCGGCCCATCAAGATGCTCTTCACCGAGCCCATCCTGCTGCTCATCACCATC
TACACCTCCTTCATCTACGGTATTCTCTACCTCTTCCTGGAGGCCTACCCCATTGTCTTC
ATCGAGGGCTACAAGATGTCCCCCACCATTGGCGAGCTGCCCTACCTGGGAGTCCTGGTC
GGCTTCATCTTCTCGTGCCTGTTCGGTTGCTTCATCTTCGAGCCCCGATACATTGCTGCC
GTGGAACGAAACAACGGCAAGCCCGTGCCTGAGGCCCGTCTCATCTTCATGATGTCTGGA
GCTATCACCTTCCCTATTGGAATCTTCTGGTTCACCTGGAGCGGAAACTATCACGAACAC
GTCCACTGGGCCGTCCCCACCGTCTCCGGTCTCTTTTCTGGCTACGGTCTCATGTCCATT
TTCGTGGCTGCCCTAAACTACATTGTTGATTCCTACCTCATTGTTGCTGCCTCTGCTCTG
GCCGCCAACACCTTCATGCGATCCATCTTCGCAGGAGTCTTCCCTCTCTTCGCTGGATAC
ATGTTCCATGCCATGCACGTCAACTGGGCCGGTCTGCTAATTGGTCTCGTGGCCTGTGCT
CTGGCCCCTGTTCCATTCCTTTTCTACATCTACGGCCAGCGAATCCGACGATCCTCCAAG
TACGCCTTTGACTTGTCCTAGAGAGAACTACCATACCCAAAATAATGTCGGGATAATCGA
CAAGCAATTTAATAGACTAATGTGATACATTTGATTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F07062g_CDS-001

Protein length: 567 aa.
Product: Polyamine transporter of the major facilitator superfamily, putative

>YALI0F07062g_CDS-001 MDLEKQHYDESSGQSEANDIMNDSGDEQKQAAEPEVLQRDEHDAVASLGPVDTRGSGMSQ
EEALSQILSHPRHRETNAPLPPMGNGKEYPPLLPSRDAYLVGFDGPNDPLHPFNWPLRQK
LMISCVLGFSTFVVTWGSAVFAPASPHIAKQYGVIQEVTTLGISLYVFGFATGPVVWAPL
SELFGRKLPICISAFMIMCFTFGVAAAKDLQTIMLCRFFASCTGSAPLVVVAAAFADIYN
NKQRGIAVLMFASVVFIGPIIAPVVGGFISESYLGWRWTMYITGIMAALGAILAVAFYKE
SYHPMLLTQRAKELRERTGNWGIYASQEVVELDLHAIISQNLVRPIKMLFTEPILLLITI
YTSFIYGILYLFLEAYPIVFIEGYKMSPTIGELPYLGVLVGFIFSCLFGCFIFEPRYIAA
VERNNGKPVPEARLIFMMSGAITFPIGIFWFTWSGNYHEHVHWAVPTVSGLFSGYGLMSI
FVAALNYIVDSYLIVAASALAANTFMRSIFAGVFPLFAGYMFHAMHVNWAGLLIGLVACA
LAPVPFLFYIYGQRIRRSSKYAFDLS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG