YALI0F07040g

Overview

Description weakly similar to uniprot|Q08905 Saccharomyces cerevisiae YOR381w FRE3
Locus type CDS
Locus tag YALI0F07040g

Location

Species Yarrowia lipolytica Positions 1029491..1031959
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2469 (nuc.)
Previous locus YALI0F07029r Next locus YALI0F07062g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F07040g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F07040gYALI0F07040g_mRNA-001YALI0F07040g_CDS-001

Nucleotide sequence

 

>YALI0F07040g
ATGACAGCCGCCGGGGTCCATGAGTTGGAACCAACAGACTACCGACACATGCTCATCTTC
CTGCTGCTACTGACGACCGCCTGGGCCCGTCCTCTGCTCACAGACAGAGGCTACCGCTGG
CAAGAAGCCTGCACGGAGGCCCTGGCATACGTGCCCTTTGAGTCCTCCAATCCCAGAGAC
ATTTCCATTCTGGGAACCCGATGCCACTACCAGCCTGCTCTGGGCTCGGTACTGCTCTGT
GTACACAGAAACACCATCCCGGAGGAGCTGGACTGGTCGTACCGGTCGCTCATTGAGAAC
TGCGAAGATAAGGGTTATTTTCTGACTCAAACCGATCTCTTCTACGCCTGGATGAACGCC
TCCGAGTTCGAGGACACGGCCTATGAACTGCCCACTGGCCCCACTAGCGGTCCTCTTGTT
CACAGACCAGTCTCCGTTCCCAATGACACCTTCGCTACCTACTATCATGTCATTGATGAG
GCCATTTACTACACCAACTTTGCAAGTTACTACTCGTACGGACTGGGGTTCTTCTGGGCA
GTCGTCTTCTTCTTTGGAGTCGTTTCCAACTTCATTGCCAAAAACGCCCACAATGTCACT
GCTCGGTTTTTTGCTGGCAAGAAAACCAACATGGTGCGTCGACACTTTTTCATGTCGGCT
CTGGGATCTCTCAAACACAATGTCCCGCTGTCTATCCGACGCATGGGCATCATGGCCGTC
CCCACTCGAGCCCAGTTTGTTGTCACATTCATCTACGTCTTTGCTGAGATCCTCTACATC
TTCATTGGGCTCGCCATTGCTCCCCGAGGTCTTCCTCTCAAAGATTTACAGGCCAACTGG
GTCAAAAGCATTGCCAATCGCTCGGGAGGCATGGCTGTGACCCAGGTGCCGTGGATTTTC
CTCTTTGCCGGTCGTAATAACATCCTTATGTGGATGACTGGATGGGGCTTTGACACCTTC
AACGTGTTTCACCGGTGGATTGCGCGAATGTGTGTGCTACACTCACTCATTCACACCATT
GCTTATGCTATGAGCGCCCATAAGTACAATTTCCTAGAGGCTGGTCTGCATCTGCCGTAC
TTCAAGTGGGGCATAGCAGCTACTGTCTGCTGCGTGGCTCTTTGTGTCCAGGCCTTTTAC
TACTTTCGACATTGGAAGTACGAGGTCTTCCTGGCTCTGCACATTGTCCTGGCGCTCTTC
TTCCTTATTGGCGTCTGGATTCATATCGACATGTTCCACTGGTGCGAATACGTCTACGCC
GCTGGAGCCGTGTGGGTCTTCGACCGGTTCATGCGCCTGTTTCGAATCTGGTGGTCAGGT
GTCTGCGTTGTTGGCGACTTTCAGATTGCTGATGAGAAGCAGAAGATTATGCGAATCACC
ATCGACTACTCGCGCATGTGGGAGGTCTATCCAGGAGCTCACCTCTATCTCTACGTGCTC
AACTCCAAGCGCGTGTGGGAAAACCACCCCTTCACTGTCTATCAGTCTCCTCAAGCTACT
AGAGACGGACGACTTAGTCTCATGGTGCGGGCCAAGGAAGGCAAGACTAAGGAACTTTAC
AACTCCATTCTCGACAGCAAAATGAACACCGTCCAGTACAACTGTCTGGTGGAAGGCCCC
TACGGCAACTCGCATCCTGTTCACAAGTACGACACCTGCATCATCATGGCAGGTGGAATC
GGAGTTACTGCTGCCTACGCCTACGCCGTTTCCTGCCTCAACCAAGAACGAGTTATGGGT
CGTCAAAAGATTGTTTTCGTTTGGGTTCTTCCTACTGACGAAGCCCTCCAGTGGTTCAAA
CCTGAGCTCGACTTCTTGCAGCAGTTTGGCAACGTTGAGGTCCAGCTGTACTTCACATCC
AAGAAGTACCGAGTGGAAAATGAGATGGAGAAGATGGTATTCGACACTCCTGAAAAGAAT
GTAGGCTCTCCACCTCCGGTGCCCAAGAAGGACAGTGTCTTTGTCAACATCATGCCTGTG
TCTCCCTTTGAGCGAGAACTTATCCCCCCTCGAAATAGCAGTCTGCCCAAACATCCCAAG
CTGATGCGATCGTCTTCTCGATCAAATACCAGTCCAGCTGCCTTTGGACAAGACCAACAT
TTCCGAACTGGCTCTTCAGATACCCTACTTAACCCCGCAAAAGGCTACTTTGACTCACTT
CCCGATAGAAAATCGACCATTCTTGACTACTACACTGAGGAGTCGAGCCCCAGAGTCCGG
ACTATGGACACCATTTACGGACGACGACCCGACATGAACGCTCTACTCAGCAAACACTTT
GAAGAGTGTCGAGGGACCTGTTCCGTCACCATCTGCGCTGCTCCTGCCATGAACGACGAC
GTCAGAAACGCAGTCACTAACAACATGGACAAGTGCAAGGGCCGAGTTGATTACTTTGAG
GAGTCTTTTAGTTGGTGAACAACTGACTGTTATTTATAAATGCATATACACTAATAATAC
TATACGATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F07040g_CDS-001

Protein length: 806 aa.
Product: Conserved hypothetical protein

>YALI0F07040g_CDS-001 MTAAGVHELEPTDYRHMLIFLLLLTTAWARPLLTDRGYRWQEACTEALAYVPFESSNPRD
ISILGTRCHYQPALGSVLLCVHRNTIPEELDWSYRSLIENCEDKGYFLTQTDLFYAWMNA
SEFEDTAYELPTGPTSGPLVHRPVSVPNDTFATYYHVIDEAIYYTNFASYYSYGLGFFWA
VVFFFGVVSNFIAKNAHNVTARFFAGKKTNMVRRHFFMSALGSLKHNVPLSIRRMGIMAV
PTRAQFVVTFIYVFAEILYIFIGLAIAPRGLPLKDLQANWVKSIANRSGGMAVTQVPWIF
LFAGRNNILMWMTGWGFDTFNVFHRWIARMCVLHSLIHTIAYAMSAHKYNFLEAGLHLPY
FKWGIAATVCCVALCVQAFYYFRHWKYEVFLALHIVLALFFLIGVWIHIDMFHWCEYVYA
AGAVWVFDRFMRLFRIWWSGVCVVGDFQIADEKQKIMRITIDYSRMWEVYPGAHLYLYVL
NSKRVWENHPFTVYQSPQATRDGRLSLMVRAKEGKTKELYNSILDSKMNTVQYNCLVEGP
YGNSHPVHKYDTCIIMAGGIGVTAAYAYAVSCLNQERVMGRQKIVFVWVLPTDEALQWFK
PELDFLQQFGNVEVQLYFTSKKYRVENEMEKMVFDTPEKNVGSPPPVPKKDSVFVNIMPV
SPFERELIPPRNSSLPKHPKLMRSSSRSNTSPAAFGQDQHFRTGSSDTLLNPAKGYFDSL
PDRKSTILDYYTEESSPRVRTMDTIYGRRPDMNALLSKHFEECRGTCSVTICAAPAMNDD
VRNAVTNNMDKCKGRVDYFEESFSW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG