YALI0F06372g

Overview

Description similar to uniprot|P50105 Saccharomyces cerevisiae YMR005w MPT1
Locus type CDS
Locus tag YALI0F06372g

Location

Species Yarrowia lipolytica Positions 945586..946921
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1336 (nuc.)
Previous locus YALI0F06358g Next locus YALI0F06380g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06372g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06372gYALI0F06372g_mRNA-001YALI0F06372g_CDS-001

Nucleotide sequence

 

>YALI0F06372g
ATGTCTCAACGCGACTCAGCTTCGCCACATCCGCAGGCCTCGCCGGGGATGGCCAAGCAG
GAGCCCGTGCTGTTGCCCGGCCGGGAAAAGTCGCCGCCCCAGCAGCTCCAGTTCCACCAG
GAGTTCCCCAACAACAGTTTCAAGCGCACTTCCACGTCGGCCATGACGCCACCAATCTCC
AAAAAGCCGAAAATGGCGCCGCAGACCTTCAACAACTACAATGCGTCTAACTATGGCCAG
TTCCAGGCGTCACCCATGAACTCGGGCGCAAATACACCCATTCCACAGCAACAAAACATG
CCGCAGAACCAACAGACACAGAACCAACAACAGGGAGGCCCCGGCGGACAGGGACCCGGA
CAACCACTCGATCCTGATCAGCTCAGTGACGTCATTTCGGCGGTGGGTCTTGATCTCAAG
CAGGAGGAGGCGCTGTTGCAACAGGGAGTGCCCCAGGCCGGCTACGGCATGCAGCAGCAG
CAATACGGATACAGACAGCAGGGACACGCGCTGCTGGACCAGAAACGGGTGGCGTACACG
GTCCGACAGCTAAGCCAGGAAGCTGGCCTGCGATTCAACAGTGATAGAGCCGGAGAAACG
GCTTTGCTCATCTCGCACGCCTGTGAGGAGTGGCTCAACCAGATTCTGACTCAGGCGCTG
GTTCTGTCGCGACATAGACGGCGATCGAGAAACTCGGTGCACAGTAGCCTGTCACGTGCG
CTCAAGGGTATCGCTGTCAAAGACAAGGAGCGGGAGGACAAGCGAGCAGAGCGCAAGAAC
CTGCTGGGTCTGGATCACGCGGAACCCGAGTCTGCAGCCAACCCCGAGGACCAGCAGCAC
AAGGCTGCCAACATGACGGCCGCCATGATGTCTTCGGGCAAAAAGAAGTACTCGTGGATG
GCAGGAGGCGTGGGAGCCAGTGCTGGAGGAATGCGAATGGGCCAGACAGGCGGAGGCAGA
GGCGACTCGGCGATAAAGACACGAGAAGCCAAGGAAGAACCCGGAGTGGCCCTCAGAGAT
TTGCTGGGAGCCCTAGAGAAGGAGAGAGCAGGAGTGGAAAAGGCCATCGTGAAGGGCTAT
GCCAAGTTGAGAAATTAACCGTCAGAGGTGAGTGGTTGGTTTTGTAAAAGAGAAGTATAG
CTGAAGGGCGACCATCAAAATCATTAGTGTGGATTCATTGAAGTGATTGGAGGAGGAGGA
TAGCTTCATCGGATAGGCTCCGTGGTTGAAAGAGGTAAAGCTTTCCAGTATGTTATGGAA
AAACTTATTGACAGCAGCATAAGAGCTAGGATACAGGTATAGCAAATAACGAAATGTATA
TTATATGATATGATGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06372g_CDS-001

Protein length: 366 aa.
Product: TFIID subunit (48 kDa), putative

>YALI0F06372g_CDS-001 MSQRDSASPHPQASPGMAKQEPVLLPGREKSPPQQLQFHQEFPNNSFKRTSTSAMTPPIS
KKPKMAPQTFNNYNASNYGQFQASPMNSGANTPIPQQQNMPQNQQTQNQQQGGPGGQGPG
QPLDPDQLSDVISAVGLDLKQEEALLQQGVPQAGYGMQQQQYGYRQQGHALLDQKRVAYT
VRQLSQEAGLRFNSDRAGETALLISHACEEWLNQILTQALVLSRHRRRSRNSVHSSLSRA
LKGIAVKDKEREDKRAERKNLLGLDHAEPESAANPEDQQHKAANMTAAMMSSGKKKYSWM
AGGVGASAGGMRMGQTGGGRGDSAIKTREAKEEPGVALRDLLGALEKERAGVEKAIVKGY
AKLRN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG