YALI0F06380g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F06380g

Location

Species Yarrowia lipolytica Positions 946888..948061
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1174 (nuc.)
Previous locus YALI0F06372g Next locus YALI0F06402g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06380g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06380gYALI0F06380g_mRNA-001YALI0F06380g_CDS-001

Nucleotide sequence

 

>YALI0F06380g
ATGTTACCTCGCGAGCTGGTGGAACTCATCTTGGACGAGCTCGATCTCGAGTCAATGTGC
GTTCTTTATGACACTAACCGGTTCTGGCGCGTAAATCTCACCGAAACCGACTTCCAGCAC
AAACTGCAGGAGTCTTGTCCCTGGTTTGAGCCGCAGTTTTCACACCGGAAGACATGGAGA
GAGTGCTCTGTGGAGTATGTGAGACGTATGAGGCCAAAGTCGCGTTTCACTCCAAAACTA
AGACTACTGAGCGACGAGCATATGTTTAAGGGGGACTTTTACAACCCGCAGGACGACCTT
CACAGTCCCCATGATCTGGTACATATCCAATGCAACCATCTGAGATTACTGGATGATGCT
TACTATACCAGTGAACATGGAATTGAGGTGGATCTTTCAGAGATGGCTGCAGAGTACTCG
GATTACGTTCATGATCCCGAATTCGACCCCCAGATGGAATGTCAGGTCTTTTCACACCCC
CATATGGTGATCATCATCTACATGGCTTTGAGTGACAGGCACTTTGACCATTGTGGTGTT
GTTGTCAAGTTCAAAGATGGAGATTGTCGCAAACCGGATATCAAGCAACATATCACGGTC
CAGGGATCCCCGTCCGTGTACACTCTGGGTGCCCATACCTTCCTCTTTTACACTCACAGC
CACTGCTTCTACTCCAGTTTTACACAACCAGCAGCCATGTATCTTTTCAAAGACCGGTAC
TTTGTGCCCATCGACATTGGTCTGAATGACCTGCGACACGCTGTGGTTTACGACGGACTG
TTTGCCTTCTTTGGTAAGAAGAAATACTACTGTCTACAGGCCAACTTGAACAGCTCTCCA
GCACGGCACTCCTCGTGGATCAAGCATCTTTTTAGATCAACAGGGAGTCACAGGGACCCC
TGGTGGGGAACTCGGTACGTCATGGTCATGGGAAGTGCCAAAAAGTATGTGTTCGACGTT
AGAAAAGGGATTTTACAAAAAGTACATGAGCAGACGTTTGAGGCCCCCAAACGGAAGTTC
ACCTGGAGAGATGCAATTGTCATAGGGACCATATTTGGTTCCGCCGTCATAAACTGGACA
GTCATCTATTTCGCCTACAGATGGTTTCTATGACGCGTACTTGTACCTGTACAATCCCAT
CCATCATATCATATAATATACATTTCGTTATTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06380g_CDS-001

Protein length: 371 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F06380g_CDS-001 MLPRELVELILDELDLESMCVLYDTNRFWRVNLTETDFQHKLQESCPWFEPQFSHRKTWR
ECSVEYVRRMRPKSRFTPKLRLLSDEHMFKGDFYNPQDDLHSPHDLVHIQCNHLRLLDDA
YYTSEHGIEVDLSEMAAEYSDYVHDPEFDPQMECQVFSHPHMVIIIYMALSDRHFDHCGV
VVKFKDGDCRKPDIKQHITVQGSPSVYTLGAHTFLFYTHSHCFYSSFTQPAAMYLFKDRY
FVPIDIGLNDLRHAVVYDGLFAFFGKKKYYCLQANLNSSPARHSSWIKHLFRSTGSHRDP
WWGTRYVMVMGSAKKYVFDVRKGILQKVHEQTFEAPKRKFTWRDAIVIGTIFGSAVINWT
VIYFAYRWFL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG