YALI0F06270g

Overview

Description similar to uniprot|Q10154 Schizosaccharomyces pombe rtf2 Replication termination factor
Locus type CDS
Locus tag YALI0F06270g

Location

Species Yarrowia lipolytica Positions 932711..934060
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1350 (nuc.)
Previous locus YALI0F06259g Next locus YALI0F06292g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06270g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06270gYALI0F06270g_mRNA-001YALI0F06270g_CDS-001

Nucleotide sequence

 

>YALI0F06270g
ATGGGAGTGAGTATGCCGGGGAGAAGGGAGGTGGAATGTAAACGTCCATCCTCGCGACTC
CTTGACTGTTGCTGTTACAGCGATCAGATAGGATCTGTATCAAGTGGCTAAGGGAAGAGA
CCTTGTTCAACCTCTCATTGTTACCTTGGGGAACAGATCGCCACTGGAATAAACACTTCA
TCAACAATCAATGTGTGTCAGAACGAGAGTCTCTACCAAAACTGTTATTGTTTAATTGTC
ACCAATGCCAGATCAGAGCAGCCAATGGTCAATATGAAGTGTCTTTTGTTTGGACTCATT
ATCGTACAGTGTTTTGTCTTCTACAATCCGTGATGCCCTCCTAAAGACTACTTCAGGTGG
TGGGCCATCTTGCCCATGACCTTGAATACTAAAAGACACCATCTTTGAACTCATATCATG
CAACCCTTCGTTACTCGAATACGAAACGTGATATGTCGTTGTGCTATACTGGATATTCTT
AACAGTTTGCTTGCCTCCAGAGATCTTGGATTCTGAAGGTCATGGCCTACTTCGATTGCA
TAACACCGTTTTTGCCAGACTGCACAATCACAGTGACCCGTCGCAGGCTCCTCTTCATCG
CTATTTGCCCTAACTCCGCTGTCTTACTGTTCATGCGTTAACACAGAATGACGGAGGGTC
CATCCCCACTCGCCGGGATCTGGTTAAAGACAAACAAAACGGCTTAACCACTTCCCAGCT
CTTCGATGCCACTCAGGACAATGCCGATTTTGACTGGAAAAACTGCCCCGTGAGCAAAAA
GTCGCTCCAACAACCTATCGTCAGCGACTACAAGGGCCGATTGTACAACAAAGATGCGGT
TCTCGAGTGGCTACTGGACAAGGACGAGTCGTCTGTGGCTGCCCAAGTCATCCCCCACAT
CCAGAGTGTCAAAGACATTGTTGAACTGCACTTTGAAACCTCCAAGGACGGAGATTGGAT
CTGCCCTTTGTCTCAACGGGAAGTCAAGGCTCTCACCTACCGGTTTGTCTACGTGGCAGA
GTCAGGCTGGGTGTACTCGGAATCCGCCATCAAGGAGTTCAAAGAATGTCCCCAGACAAG
TGTCCCATTTTCGGACAAGAACCTCGTACTTATCAATCCCATCAGAGAAGAGGATAAGCT
GGCTGCCAAGGCGAGATTGGATAGGTTGACTGAAGAAGGACTTACACATGGCCTTAGGAA
GATCAAGAAGGACAAGAAGGACAAGAAGGACAAGAAGAAGAAGGAATACAAGGTGGTGAA
GCCATAACGATGGTTGTAAACATACAGTAGCCATGGACCTATAGATTATTTATACACATC
TAATTACGAATAAGAGTTCATTAAGTACAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06270g_CDS-001

Protein length: 209 aa.
Product: Replication termination factor, putative

>YALI0F06270g_CDS-001 MGNDGGSIPTRRDLVKDKQNGLTTSQLFDATQDNADFDWKNCPVSKKSLQQPIVSDYKGR
LYNKDAVLEWLLDKDESSVAAQVIPHIQSVKDIVELHFETSKDGDWICPLSQREVKALTY
RFVYVAESGWVYSESAIKEFKECPQTSVPFSDKNLVLINPIREEDKLAAKARLDRLTEEG
LTHGLRKIKKDKKDKKDKKKKEYKVVKP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG