YALI0F06072g

Overview

Description some similarities with uniprot|Q9C2C5 Neurospora crassa Probable cutinase transcription factor 1 beta and other transcription factors
Locus type CDS
Locus tag YALI0F06072g

Location

Species Yarrowia lipolytica Positions 902443..905005
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2563 (nuc.)
Previous locus YALI0F06061g Next locus YALI0F06094g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06072g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06072gYALI0F06072g_mRNA-001YALI0F06072g_CDS-001

Nucleotide sequence

 

>YALI0F06072g
ATGAAGAACATGGTTTCGACGCACGTGTTTCCGGCGAAGAACGACTCGTACCGGGCACGT
AAGCGCGCGCACAAGGCGTGCGATCAGTGCAAGCGCCGGCGAAAGCGTTGTGAAACCAGC
AACGAAAGCGACAAGTGTGATCCGTGTTTGCAGGCTGGTTTGGAGTGTTCGTTGGAGGAG
GCTGCTCAGAAGGCCCATGACGCTGGTGCACCAAAGAAGGATGGTCCCATCAATATGGTC
ATGTACCAGGAGCCGGAGGAGGTGGTGAAAAACGAGTTTGAAGGAGGCTCGACAGCTCCG
GCCACATCCATCCTGGGAGGACTAGGATCGTTCCAAGCCTACAACAACTTTGGAATGACT
CAGCCGCAACAACAGCCTACTCAACAGGTTCAACAACAGCAGACGCCCATACACCAGCCT
ACACCGTCCACCCACTCGGATGACGAAAGAGGAAGACCGGCCCAACGATTTACACTGTTC
CACAGCAACACAAACAGAAGTATTTCCCGGGCATCAGCAGACCGACGGCCGCAATCGCAT
CTCTCTCCGACCGTTCGACGAGCAGTGGGGGCCACGCCAGCGTCACCCTCTTCGCCCAAA
GAAGACGATCCCGTGTGGGTCAAGAAAAGCACCCCGCAGCTCAACCCCCATCTGTACGCC
TACTTGTCGTCGATAAATGCGTTCTCGATGCCGCTCAAACATATCCGGGACGGCCTGGTA
GACATATACTTTGAGCATATGGATACTTTTCTGCCATTGGTAGACAAGACGCAGTTTCTC
AACCTGCATCGCCAAGGACAAGCACCTACCCTACTAATGCACGCTGTCCTGCTCGCTGCT
AGTCGACACTCCCAGGCTCAGACCTATATTCAAAACCTGCGTCAGTTTGCAGCTTCTACA
GCGTCGAAAATCAGGGCTCTTCTGTTTGCAGAAGTCGAACAGGACCGCCTGACACTGGTG
AGAGTCTACGCGTTGATCTCGCTGCACGCAGAGGGACCCGATGGAGCTGAACAGGGTTGT
TCAGACCTGCAACACGCCATTCACTACTCTATCTCTCTGGGCATCCACCATGACCGACCC
TTCATCAACAAGACGTCTTTGCAACAGCTGTGGTGGTCTATTTGGTGTCTGGATCGACTC
AACAGTTTGATTAATGCCCGGCCAGTGATCATAGACTCACGTGACGTGGAAGTATCCAAG
CTGGACGACAATTCACAGCTGCCTAGACTAGTCTCCATCCTCGGGACTCATGAAAGTATC
ATGAACTTGTACCGGGGAAGAAACTCAGACGTGTCCATGAAAACAGTCACGGCCCTTGAT
ATTGTGCGACACAAGATTCAGCCTCTGGATTCAGATTCGCCGTTTCTTCAGCTCGTTTGC
CATACTCTTCAGCTTCTGACATACCCTCAGACCATTACAATTTCCACTTCAACAGTCTAC
GGGGCCTTTGGCAACATGTCAACGCCCATTGCTTTGGCTCTGACGTTCTCCAAAAACGGT
CGCACTGTCCCTTTGCAATTTAGCAATGGACCGGAGTTCCAGACAGTGCTCCGGAGCGCT
TCTCAGATCCTCCACTTGTCCAAAAACTACTCGGGTTCGCTGCCAGGATTGCCAATTGTC
CCCTTCTCGATACAGTTGGCGTTTATTGTACTTGTGAGACTGTTCTACGACCGGCCTATG
CCCTTCCCAGACGTCTGTGGCATCCTAGACATGTACTCGGACCGCTGGTGGGCGACCGAG
GCCATGAGCATGATCGGAGGAGGGCTGCTAAAGAACGAGAGTCAGGGTCAGCAACAAAAT
AAGAGCCAGATTCCGAACCAGCCCCAAGTCGAGGCGCCTGTGCGAACGATAAGTCCCCAG
CCCATGGGAATGGCGAGTCCGCAGTCAATGACCATGACTCCTAGTCCAGCGCCTCCTACT
GTCTCTGTGAACGCTCCTTCGAATCAAAACTTCCAGCTGCTCCAGCAACAGGCGCTGGAC
CAGTCGATGGTGTCTCATCACGGTCAGCAGCAACATGGACAACAGCAGCAACAACAAAGA
CAGGTCCCGATGGCTAATGCGAGCCAGCGAACGTCACCTGGATCACTGTCTAACAAACGA
AAGGCTACTCTAACCATCCCCCAGGCACAGATCGACCGGTACTCCCAACACCCTCTGGCT
CGTTCACCTATGGGATCTGCATACTCGGAGGACCTGGGCCAGGACTCATACTTCTCCAAC
ATGAACACTGACTTTTCATATGGAGTGCTGGGAGGGGAAAATGTGGTGCCCCCAGCTGCT
CCTCAGGGCGACCAGACACCTACTCTGTCGACAGCCATGAAGGACGAGTACTTTTCGGCT
CATCGGCCGAGTTTGGACGCTGGAAACAATGGAGGAACCGACGGTGGAGGAAACTTTTAC
GCCCAGAACTTTGAGAACATCAACTACCTTGATGAGCCCTCAGTCAAGTTGGAGTATGAT
GAGTTTCAGTTTTAAGGGGTGACAGGAGGTCTCGTAGTAGAGTGGAGGACATGCATCACT
GCTTGTAGATCATAATTTATTGCATTTTTGGTAATCCAACGCG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06072g_CDS-001

Protein length: 825 aa.
Product: Conserved hypothetical protein

>YALI0F06072g_CDS-001 MKNMVSTHVFPAKNDSYRARKRAHKACDQCKRRRKRCETSNESDKCDPCLQAGLECSLEE
AAQKAHDAGAPKKDGPINMVMYQEPEEVVKNEFEGGSTAPATSILGGLGSFQAYNNFGMT
QPQQQPTQQVQQQQTPIHQPTPSTHSDDERGRPAQRFTLFHSNTNRSISRASADRRPQSH
LSPTVRRAVGATPASPSSPKEDDPVWVKKSTPQLNPHLYAYLSSINAFSMPLKHIRDGLV
DIYFEHMDTFLPLVDKTQFLNLHRQGQAPTLLMHAVLLAASRHSQAQTYIQNLRQFAAST
ASKIRALLFAEVEQDRLTLVRVYALISLHAEGPDGAEQGCSDLQHAIHYSISLGIHHDRP
FINKTSLQQLWWSIWCLDRLNSLINARPVIIDSRDVEVSKLDDNSQLPRLVSILGTHESI
MNLYRGRNSDVSMKTVTALDIVRHKIQPLDSDSPFLQLVCHTLQLLTYPQTITISTSTVY
GAFGNMSTPIALALTFSKNGRTVPLQFSNGPEFQTVLRSASQILHLSKNYSGSLPGLPIV
PFSIQLAFIVLVRLFYDRPMPFPDVCGILDMYSDRWWATEAMSMIGGGLLKNESQGQQQN
KSQIPNQPQVEAPVRTISPQPMGMASPQSMTMTPSPAPPTVSVNAPSNQNFQLLQQQALD
QSMVSHHGQQQHGQQQQQQRQVPMANASQRTSPGSLSNKRKATLTIPQAQIDRYSQHPLA
RSPMGSAYSEDLGQDSYFSNMNTDFSYGVLGGENVVPPAAPQGDQTPTLSTAMKDEYFSA
HRPSLDAGNNGGTDGGGNFYAQNFENINYLDEPSVKLEYDEFQF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG