YALI0F05896g

Overview

Description weakly similar to uniprot|D5G5W8 Tuber melanosporum hypothetical protein
Locus type CDS
Locus tag YALI0F05896g

Location

Species Yarrowia lipolytica Positions 872020..874449
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2430 (nuc.)
Previous locus YALI0F05874g Next locus YALI0F05918g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05896g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05896gYALI0F05896g_mRNA-001YALI0F05896g_CDS-001

Nucleotide sequence

 

>YALI0F05896g
ATGACCGCCAACGACGACGACATGGTCACGTCTCCGCTATCCGAGCTCGACTCCGAGGCC
ATGCTGGACCTGCAGCAGCACGATGAGGACGAAGCCAAGGAGCTGAAGGATGACGTGGCA
GAGGACCACGACACAGGCACAAACGGAGACACACACACACCAACTGACAAGAAGACCCGT
TCTTCTCCGTCTCCATCGACAGGAGCAACCGCAACCTCGGCCACGGCTACGGCCACAGCC
CCACCTACAGCTACAGACACACAATCGGCGGGCGACAAGGGCTCCGTGACGCATCCCGAG
CACGCCGACTCGGGTATTGCCACGGTCGCGAGCATTGTCTCCACAGACGACATGCCGCTG
CCCACGTCCAACGGCAGAAAAGCAAGTCTGCTCAACCCCGCGGACCTCAGCGACGACTCG
TCCGAGCTCTCGGAACTCGAGGACTCCGAGGCCGAAACCGAACGGCTCTATCTCAACGAT
CTGGTCGACGAAGAGGAAGAGTCGTTCAAGCGCCGGCGCGAATCGTCGTCGGAAGACCAC
ATCCGGCAGATGAAGCGTGAACGCGATGAGGAGGATGACAGAGATATTAAGCGGGCCAAA
GTTAATGGTCAAACCGACGAAAATGATGACATTGGAGAAGAAGACACAACGGCCCGAATG
GATGTGGATACCACAGCCAAGGCAGAAGGAGAAGGTGGAGATGTGGGTCCTGACACCGGG
CTCATCACTGCCAGTGCCATTGCCTCGGCTCTCGAGGAAGTACCGCCTCCCTTGCCCGTG
CCTGTTGAGGACATCAAGCCTGAGGTGAATCATATCTCTGAGAAGGAAGGAGAGGCTGTG
GATGAGTCTAAGGAGGCCGAGGCCAAGGAGGGGCTCAAGGAATCAGAAACGGCTGATGTC
GACAATAAGGACGCCAACGAAACCAAGGATATGCCTACGCCCATCAACCAGACTGAGCCC
TCCGACAATGAACACGAGGAAGATAAAGAGGAGGAGGTGACCAAGGAGGACAAGGACAAG
GAGGAGAATGAAGACGAAGACGAAGACGAAGACGAAGACGAAGACGAGGAAAAGGAGGTG
GAAGACGAGGGCGACGAGGAAGGCGAAGGCGACGACAATGACAAGGAAGACTCTCCCGCA
GACGCAGACAAGGTCGACATGCGGCCTGCGGCCATGACGTCTCTCGCCGAGATCGAGGTC
GATTTCGCCAAGCTCCGCGACTTTATGTTCAAGGAGAAGCTGGCGGCGTTTGAGGTGGAA
ATGGGGCTCTGTGTCAAGGGCACACATCCCGAGCTGCATGCGGTCTACGAGCAGATCTCC
AAGATGCGTGACGACAAGATCAAACTGGCCAAGACGCGTCGCAAATACAAGCTGCAGTGC
ATCAACAACCAGACACGTGCGTCGCGTGTGCAGATTCACCAGCAGTTTCTCAAGGATCAG
GGTGACGCCCGAAGCGGCTTGTTGCTCAAGACGACCGAAGAGTGGTATAGAGTCAACCGG
GAGAGACGGGCCATGGATCTCATGGTTCCCGACTACGGCTACACTATCCCTGAAAGCAAG
AGCGAGCAGATTCATCAGCGGAACGCTCAGGTGAACGAGATTTCGCTCTTGTCTGGAATA
TCCAAGTACGTTGGTTTCCCTGCTGCGCCTGTGATTTCTCAGGCAACGGAGGACGAGACC
AACGAGGATCTGACGGCTCTGGGGCTCCAGCGGCCTCCTGTTCCTCATGCAGCCTTCCCC
GTGCCTCCGGGAATCATGCAACCTATGGGTGTGCAACCTGCGCCTCTTCAACAGGTGCCA
CAGCAACAGCCTCCGCCTCCACAGACTGCCCAGCAGCAGGTTCACCAGCAGACTCCACAG
CAACAGCACCAACCTCCCCCACCACCTCCACAGCAGCAGCAGCAGCAGCAGCATCAGCAT
CAGCCCACGCCGCCTCCCATGGGTCAACACAGACTCAACGGACACGAGCAGCAACACATG
CCTCTGCCACTAGGCGCGCCTCTCATGATGCAGCATCCCATGTACCATCAGGGACCGCCA
ATATACGGAGGGTACCAGTACCCTGCTGTGCCGTATTACCAGGGTGGCAATCTTCTGCCT
CCGCCGCAGACCATGTACGGACATCCTCAGATGTATGGGCAGGTGTTGCCACCGCCGTAT
ATGTATCAGAAGAGGGAGGAGGAGCACGAGTGACGAGGCGTCGCCCAATTGCTACTAGCT
ACAGCGCACAAGAGATCTCATTTGATCTTACTGTCGCGATGTTCCAATCAATGCTAAGAA
AGGCATACTAATGTGGTTCAGGAGTGGTTCAAGAGTGGTTCAAGAGTGGTTCAAGACCAT
GTCTCATACTCACAGCAACAGTGCTACAGTCGTTTCTACAGTTAGACGGCAGACTCATAA
TTTATTGTAATATATGGTGTATTATATGGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05896g_CDS-001

Protein length: 731 aa.
Product: Conserved hypothetical protein

>YALI0F05896g_CDS-001 MTANDDDMVTSPLSELDSEAMLDLQQHDEDEAKELKDDVAEDHDTGTNGDTHTPTDKKTR
SSPSPSTGATATSATATATAPPTATDTQSAGDKGSVTHPEHADSGIATVASIVSTDDMPL
PTSNGRKASLLNPADLSDDSSELSELEDSEAETERLYLNDLVDEEEESFKRRRESSSEDH
IRQMKRERDEEDDRDIKRAKVNGQTDENDDIGEEDTTARMDVDTTAKAEGEGGDVGPDTG
LITASAIASALEEVPPPLPVPVEDIKPEVNHISEKEGEAVDESKEAEAKEGLKESETADV
DNKDANETKDMPTPINQTEPSDNEHEEDKEEEVTKEDKDKEENEDEDEDEDEDEDEEKEV
EDEGDEEGEGDDNDKEDSPADADKVDMRPAAMTSLAEIEVDFAKLRDFMFKEKLAAFEVE
MGLCVKGTHPELHAVYEQISKMRDDKIKLAKTRRKYKLQCINNQTRASRVQIHQQFLKDQ
GDARSGLLLKTTEEWYRVNRERRAMDLMVPDYGYTIPESKSEQIHQRNAQVNEISLLSGI
SKYVGFPAAPVISQATEDETNEDLTALGLQRPPVPHAAFPVPPGIMQPMGVQPAPLQQVP
QQQPPPPQTAQQQVHQQTPQQQHQPPPPPPQQQQQQQHQHQPTPPPMGQHRLNGHEQQHM
PLPLGAPLMMQHPMYHQGPPIYGGYQYPAVPYYQGGNLLPPPQTMYGHPQMYGQVLPPPY
MYQKREEEHE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG