YALI0F05786g

Overview

Description some similarities with uniprot|Q6CAJ2 Yarrowia lipolytica YALI0D02299g
Locus type CDS
Locus tag YALI0F05786g

Location

Species Yarrowia lipolytica Positions 857525..859963
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2439 (nuc.)
Previous locus YALI0F05764g Next locus YALI0F05797r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05786g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05786gYALI0F05786g_mRNA-001YALI0F05786g_CDS-001

Nucleotide sequence

 

>YALI0F05786g
GCAATCGACAGCAGGCGGCCAAAGAGCGGCCAAAGAGCGGCCAAAGAGCGGCCAAAGAGC
GGCCATGAGAGACCAAAGACGCAAACACTCGACGCAAACAGACTCGACGCAAACAGACTC
GACACAAACACAACCAACTGACTCACACTCAACCCAACTGACAAAGCAACCAACAAAGCA
ACTGACACATACAAGCAGGTACCGAACAGTGCCGACACAGAAGCAGGTACCGCAGCATCT
ACAGACACAAACACCTCAGACTCAGCACCACTCCACTTGTACCGCCAATCAAGTCGTTAG
ATGCAGCTGATCAAGGGGTACGGGCGTCTCACACGCCGGTGAAGCTTGCATGTGACCGAA
GTGGGCTCTGGAGTACCTACAGTACTGTAGGGAGATCTGCACTGGAGTAGCTCGCCGAAA
GACGCCAATCAGCTGTTCACCCGTCGACGAACAATCGCTTTGGCAGAGGGAGCTGCAGAG
AACGGCGCCTGGTCTCGTCCTAGTCGGAGCGATTGTGGCGGTCCTTTCAATGAACGGCTG
TCCCCGGCAGCCTACAAAACATAACTGTTCCAGTTCACGAGAGCATGAGTGTGGGATGTA
TATGAAAGTATCTTCATTTCAGGTGCTTGCCAGGTGCTTGTCCCGCCCTCATGCGTCTCC
ATAACCACAGCTACAAGCACTGCACCACTGACGGGTACGTACCCGCATCGATTTGGCCAC
TGATAAAAAGAAACGCAAAGTGGACAGATGGAAAGGTCTATTGGATTGAACGGTGCAATT
GGTCGCAAACGTTAGTCGGGCGTTGAACTAATTCCAATGCACTTCGGATCGCTTGTTTTT
TGTTTGTTTTTACATATGGCCTTACTCAGCGTCAGAACCATGGTCTCTACCGGAACAATG
GCCTCTGCCAGAACAATGGTCTCTGTTTGCCACTCCGTATATCGCCAAAGCCCTCCCTCC
ACGTGCAAAGTGGGCTAACAATTGGCTCTCCACGGCTACTTTTCTTTTTCATCGACATTT
ATTACCGAAGATCCCGACGCTCAACTTAGTTTGGCCAACTGCCAGCCAAAACCCACCGTG
GAACTGTTATTGTACTGGCAGGTACCTGTCAACTACCTGAACTTGTCTTTGGATACCTCA
CAATGATACCACAACACAATACACCACATTTCACACAGCATACCTTCGTGAAGCTGACCT
CAGGGTACCACCGTGGTTGCCTGTACCCGGACTAGGCCGCCTCAGATCGCCGGAGCTATT
CCTAATCCATTTTTATGCACTTTTTAGCTGCTTCTAGACGGAAGGCGATCGGCAAGGTAC
GCTGTATTAGGTTATTCTAGCTCTAGACGTTCGACAGAGGTGGTTGTGAAGGAATATCTC
GAGTTTCTGGAGTTATATAAGGGTCACCTCCGTCCCGGTATTCTCACCAGACAAGTCCTC
AGTCACACTCTTCACGCACCTTTCTACCCACCACAATGAAGTTCTCTACTGTTCTCCTTA
CTGCTGCTGTGGCTGCTGCTGAGCTCATCACTCTTGACTGGGCCGAGACCACCCAGGTCA
TCTCCATTCCCGACGCCACTGCCGGCGAGCAGGCCACCTCTGCCGTTCTGTCTGCCGCTT
ACGATGCCATCCATGACCACCTTGCTGCCCAGACCACCCCTGCCCCCGACGCTGAGAAGG
CCGAGGAGGCTCTGGACCTCACCATCCAGGCCCCCTTCTTCACCATGGGTCTGTGGATCC
CCGACCTGTCCGACTTTGGCATCGGCACCAAGAACGAGACCATCTCCGAGTGGCTGCACC
GAATCTGGGAGGAGAAGCAGGGCGTGGCTTACCCCAACCGAAAGCGTGAGTTCACCCCCG
AGGAGATCAACGAGATCCAGGAGGCCGCTGAGGGCATGGACCTGACTATCCAGGCTCCCT
TCTTTACCATGGGTCTGATCATCTCTGACGCCGATGGCCACGAGTCCACTGTCTGGGTCA
CCGAGACTGTCTCTCCTGCTCCTTCCACCACCCCTGCTCCTGCTGCTGAGCCTTCTTCTT
CCGCCCCCGCTTCTTCAACCGAGGCTCCCTCTACTTCTGAGGCTCCCGCTTCTACCTCCG
AGCCTGCTTCTTCTTCTGCTGCTCCTTCTTCTGCTGCTCCTTCTTCCACTGAGGCTCCCT
CTTCTACCGAGGCTCCCACTTCTTCTGCTGCTCCCACTTCTTCTGCTGCTCCCACCTCTT
CCGCTCCTGCTTCTCAGGAGCGAGTTACCGTCACCGACACCATCGAGGAGCCCTGCCCCG
AGTCTACCACCTCTCTGCCTCCCACCACCCTGGTTGTCACCACCAAGGAGTGCGACTGCC
ACGACGAGTAAGCAGTCTGCTAACATGTTCTAGGGTCTGGACCCGACTTTCACTTCTTAT
TTCTAGTTTTTATACCTTTTAATATTATTCACGATCATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05786g_CDS-001

Protein length: 292 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F05786g_CDS-001 MKFSTVLLTAAVAAAELITLDWAETTQVISIPDATAGEQATSAVLSAAYDAIHDHLAAQT
TPAPDAEKAEEALDLTIQAPFFTMGLWIPDLSDFGIGTKNETISEWLHRIWEEKQGVAYP
NRKREFTPEEINEIQEAAEGMDLTIQAPFFTMGLIISDADGHESTVWVTETVSPAPSTTP
APAAEPSSSAPASSTEAPSTSEAPASTSEPASSSAAPSSAAPSSTEAPSSTEAPTSSAAP
TSSAAPTSSAPASQERVTVTDTIEEPCPESTTSLPPTTLVVTTKECDCHDE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG