YALI0F05764g

Overview

Description highly similar to uniprot|O00103 Schizosaccharomyces pombe Ubiquitin-conjugating enzyme UBCP4 OR SPCC1259.15C
Locus type CDS
Locus tag YALI0F05764g

Location

Species Yarrowia lipolytica Positions 855547..856178
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 632 (nuc.)
Previous locus YALI0F05742g Next locus YALI0F05786g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05764g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05764gYALI0F05764g_mRNA-001YALI0F05764g_CDS-001

Nucleotide sequence

 

>YALI0F05764g
ATGCAGATGGAAGCCCAGAATGCCGACCCCTTTGCTGAAAACCCCGCCAAGCTGCAAATG
TCGGGATCCAACTCAAACGACGGCCACTCGGTCACCAAGCGCCTGCAAAACGAGCTGATG
CAACTCATGATGTCCGACACGCCCGGAATCTCGGCGTTCCCCGTGTCCGACGCAGATCTG
CTCAACTGGACCGGCACCCTGACCGGCCCGGAGGGAACGGTCTACGAGGACCTGACGTTC
AAAATCTCGCTGGCCTTCCCCCAAAACTACCCCTACACCGCACCCACAATCAAGTTCATC
AGCCCCATGTGGCATCCCAACGTGGACATGTCCGGCAACATCTGCCTGGACATTCTCAAG
GAAAAGTGGTCTGCCGTGTACAACGTGCAGACAATTCTCTTGTCCCTGCAGTCGCTGTTT
GGCGAGCCCAACAACAAGTCGCCTCTCAACGCCCAGGCCGCCCAGCTGTGGGACACGGAC
ATGGATGAGTACAAGCGGCTGCTGATGCAGCGGTACGAGGCCCCTGACGATGAGTAACCA
TTAGCATGACGTCGCACCGCGACTTGTAACAACACAGCATAGCAACTTCGGTTGAACCAT
ACCCATAGTGAATGGAGAGAGAGATCAGAGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05764g_CDS-001

Protein length: 179 aa.
Product: Ubiquitin-conjugating enzyme UBCP4 OR SPCC1259.15C, putative

>YALI0F05764g_CDS-001 MQMEAQNADPFAENPAKLQMSGSNSNDGHSVTKRLQNELMQLMMSDTPGISAFPVSDADL
LNWTGTLTGPEGTVYEDLTFKISLAFPQNYPYTAPTIKFISPMWHPNVDMSGNICLDILK
EKWSAVYNVQTILLSLQSLFGEPNNKSPLNAQAAQLWDTDMDEYKRLLMQRYEAPDDE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG