YALI0F05478g

Overview

Description similar to uniprot|Q08683 Saccharomyces cerevisiae YOR249c APC5 component of the anaphase-promoting complex
Locus type CDS
Locus tag YALI0F05478g

Location

Species Yarrowia lipolytica Positions 818338..820911
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2574 (nuc.)
Previous locus YALI0F05456g Next locus YALI0F05500g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05478g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05478gYALI0F05478g_mRNA-001YALI0F05478g_CDS-001

Nucleotide sequence

 

>YALI0F05478g
ATGGAATATTCGCTGGTGGGGTTTCTGACCCCGTTCAAAATCGCTCTGGCGGGGCTCATC
ATGATATATCTTGATGGAGACATTGCCACAGACCGCATGTCTCTCATGCTCAAGCTACTT
CCCTACGTGCAGGGCAACCATCTCGATCTGACTCTGGATCAGCTACTGGAGCTTACCGGC
GACACAAGGACGATTTCGACAGGTGAAACGGTCCAGAAGGTGCTTCTGCGTCGGTTACAG
GCCATAAAGTCGCTGGACGCTCTTGCCATGTACATTCTGTATCTGGATCGGTATCTGGAT
GAACCCAACGAAGCTCATCCTGATATTGAAGATGTACACGACCACCGTGCCCAGATTCCG
CGTCTAATCAAACGTGACTCGTTCTTCTTTTCGTTTTTCCGAAAATGCTTTCTCTCGTTC
GATTGCATGGAGTTTGACGAAATCAGTCGCGAATTTGAAGCTCTACAAACATGGCTGTCA
CGATCACGTCAGTTCCAAAAACTCGAACAGCCGCCCAACTACGACGATTCGATACTGGAC
GAGTCCGCCGTTGAGCTGGACGACGCCAGCGCCTTCTCCAGCTATATTCACGACTTTGTG
GAAAAGTCCCACAACAATCCCAACTTGATGGCGTACTCGGACGTGGATCAGGTGGTCCAG
CAGCATACCAAGGACATCCGGGAGAAGAAGAAACATCTGGACCCACAGATCGCGTCTCTG
GCAACCAGCATCGAGGGCCAAGTGCCCCCTTCATTGCATCATATGGAATATGTGATCAGA
CACGAGGCACGTGACTCAAAGGCCCTCGACTACCTACATCAGTACTTTGACTACACTATG
CATTCCGACAACCGCAGCATGTTCCACTATGCGCTCTTCAGTCTAGCTACTTTCCATGCT
GACTTTGACTGCAATCTTGAAGCCTGCAGAGCTGCAGAGGAGGCTATCAACATGGCCAGA
GAATCTAACGACCATGCCGGACTCGCGTACATTCTCTCGTGGTTGTACTCCTTTCTGGAG
AACCGTCCCAGAGACAAGAAACTGACCCAGGCATTCCAAGATGAGCAGTTTGGCACACAG
GAGCAGCTTCTCAACTTTATCAAGCGAAGATGCTCCTCGAACCCCACTCTGTACGTGCTG
GGTCAGTTTTCCGAGACAAAACACATTATGGCCACGTCTGGGTCGCTGTCTCAGGCCCTG
GAGTCTCTGTTCAGAGGCACTTTTGTGCAACTTCATCACGATCCCCAGACAATCAGCGTG
GATCAATGTTTGTTGCAGTCCGTCATCTACTCGCGAATGGGAATCGGAGCACTGGCCATG
GTGCCCCTAGATATGGCCCTCGAGTCGGATACAGATGTACCCCTGACTACAGTGCGAGAT
CTTAAGGCGTCTGTTCTTCTGGATCGGGGCCGGGTATTCGAAGCCACAGAGCTTTCTTCC
GACCCGATCATTCAGCTGCGAGTTGCCATGCACCACGAAGACAGTGATCAGGTGGAGCGT
CTATTAGCTCGATTCGAGTCCAATCTTGTCTACCCTCAACTCGAGTACCGCTACTTGGAG
TTAAGCTGGGCACGGACCCAAAAGGGGTTCTCTTCTGCTCTTCTTGATTCTATTCAGGAG
CAGATTGAGTGGATTGAAAGCAGGGGGCTTGATGTGTACTGGAAGCTGCGGTTTGTCTTA
CTCTATACTGAGTGTCTGATTGACCAACAGCCTCATTCCAGTCGAGCTCTATCGCTCACA
TTTAAGTGTGTGCAGCAGACTGAGGCGTCTGGAATCACCGTCCTACTTTTGGAAGCCATC
CAGCTGCTGGCCAAGGTGCTGGTGGGGTCAGGGAACTATACCGACGCCATTTCAGTTCTT
GACGCGTCCATGCCCAAGTGCTGCGAGACAGAGAATGCAGAACTCATTGGCAGGGGATAT
TCTCTGCTTGCAGATGCTGCTATCGGGTACTACCGAGTGTCTGAGATTAGCGATCTGCTC
AATTCTGCAAACAGGTACTTGCATTCGGCTCTGCAATGGTACAGTAAGGTGGAGAAGAAA
CGGGAGTCACGGGATCTGTCGGCTAAGCTGTACCATCTGGCGAAGTTGAGGAAGGTCGAT
GATGCTACCCTGCATGCTTATGAGAAGAGGGCGTTGAGAGAGAGGGATAGGGAGTGGGAG
TAGGGGATGGAAGACTTCGGGCTATATGTGAGAAGTTGGCGGAAGGAAAGGTTCCATAGG
GGTCCTTGCACGTCTGCACTCTGAGGGATTTTTTCTGCATATCTGCTGACTCAGAGGGTG
TTGGGGTTGGAGTACTCGGACTCAATGAGGTGGATAGATGGTGTACTTCTGTTTGAGATG
ACAGTATGTACTATATGCACTTCGGTTGAGAGGGAGGAAGGGGTACTGGCTGAGAGATGG
GGCATACATGAGATGGAGTAGTACTTACTATAGTCAGAGTACAGACCATACGTATGTAGG
TAATCGCATTTAATGACTTGTGTCGACATCTGTTGGTGATGGTCGTAGCTTTCGGAACAT
TGCACGACTTGAAGGCTCAAGGCTCCCAGAGGTCTCGTATGCAAGGATTTATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05478g_CDS-001

Protein length: 721 aa.
Product: Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), putative

>YALI0F05478g_CDS-001 MEYSLVGFLTPFKIALAGLIMIYLDGDIATDRMSLMLKLLPYVQGNHLDLTLDQLLELTG
DTRTISTGETVQKVLLRRLQAIKSLDALAMYILYLDRYLDEPNEAHPDIEDVHDHRAQIP
RLIKRDSFFFSFFRKCFLSFDCMEFDEISREFEALQTWLSRSRQFQKLEQPPNYDDSILD
ESAVELDDASAFSSYIHDFVEKSHNNPNLMAYSDVDQVVQQHTKDIREKKKHLDPQIASL
ATSIEGQVPPSLHHMEYVIRHEARDSKALDYLHQYFDYTMHSDNRSMFHYALFSLATFHA
DFDCNLEACRAAEEAINMARESNDHAGLAYILSWLYSFLENRPRDKKLTQAFQDEQFGTQ
EQLLNFIKRRCSSNPTLYVLGQFSETKHIMATSGSLSQALESLFRGTFVQLHHDPQTISV
DQCLLQSVIYSRMGIGALAMVPLDMALESDTDVPLTTVRDLKASVLLDRGRVFEATELSS
DPIIQLRVAMHHEDSDQVERLLARFESNLVYPQLEYRYLELSWARTQKGFSSALLDSIQE
QIEWIESRGLDVYWKLRFVLLYTECLIDQQPHSSRALSLTFKCVQQTEASGITVLLLEAI
QLLAKVLVGSGNYTDAISVLDASMPKCCETENAELIGRGYSLLADAAIGYYRVSEISDLL
NSANRYLHSALQWYSKVEKKRESRDLSAKLYHLAKLRKVDDATLHAYEKRALRERDREWE
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG