YALI0F05456g

Overview

Description similar to uniprot|Q08826 Saccharomyces cerevisiae YOR357c GRD19, putative golgi membrane protein-sorting protein (nexin)
Locus type CDS
Locus tag YALI0F05456g

Location

Species Yarrowia lipolytica Positions 816634..817836
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1203 (nuc.)
Previous locus YALI0F05434g Next locus YALI0F05478g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05456g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05456gYALI0F05456g_mRNA-001YALI0F05456g_CDS-001

Nucleotide sequence

 

>YALI0F05456g
ATGAGCTCACGAGCATTTGCATCCATGGAGGCGTCGCCCAAGAAGCCAGAGGCGCTGCAG
CGGCCCGACATCAAGCAGCAGTCGTTTGCCGAAATCTACGGCGTGCCCGAAAACTTTCTC
GAAATCGAGGTCCGAAGTCCCCAGACACATGGTGAGTATGAGAGACCGGTCGGCGATCCG
GCCATCAAGAAGCAGTCGCAGAGGTAGCGTGACAGAGAACCGGCTGTCAAAGGCTACAGG
AAGATGTCTCTTACCTGTGAGGTGGTTCATGGCGTAGATATTATCATTCTGGCCACCACC
TTATCAGCAACAGCACACTTGAGACATGTTGTTGGGGGGGTGGGAGCTGAGAGATGATAG
AGTGGGTTGCGGCGCAGTACCAGACGCAGACAGAAGGACCGCCAACTACCAGATGTCCTG
TTACTGCCCATATTCATGCTATCCAGTCACCACCTTCTGCCATGTCACACGACCAATAAT
ATGACACTACCCACCGGTGCCAAGAAGAAGACAATACAAGACGGCGAATCAACAGACACA
GAACACAGGTAGACACGAAAGGGGAAAGGCACCGATCAGTCGGAGAGCTTGTACTAGTTT
GCAATCCACGATCTAGCCGGCCACGTATACTGTGTCATACCTCTCACTCCCATGAGAGGC
AAATTGAGCAGCCGTGGATCAACAGACACCAGCCAGGCTGATTGCGACGACGACTTAGTC
CTCTACCTACAACCCTCCACCCTCAACCTGTTTCTCCACTGGTATTTCTACACGACTACT
ATTGCTAACCCAGGAATCGCCCGAAAAATGTACACTGACTACGAAATCGTATGCCGGACC
AACATCCCCGTGTTCAAGCTCAAATCCTCCGTGGTCCGAAGGCGGTACTCGGACTTTGAG
TGTTTCCGAGAGATTCTGGAGCGGGAGAGCACACGGGTGTCCATCCCCAGCTTACCTGGC
AAGGTGTTCACCAACCGGTTTTCCGACGAGGTGATTGAGGCTCGACGTGAGGGTCTGGAA
AAGTTTCTGCAGACCGTTGCAGGCCATCCTCTGCTGCAGACCGGCTCCAAGGTTCTGTGT
GCCTTCATCCAGGACCCTCAGTGGGATAAGAACCAGTGGATCTGAGCGCAACCACTACGA
GTACAGGCACAAGGACGTTTACGCATGACGGAGAATGAATATTAATATGCAATATTTGGC
TGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05456g_CDS-001

Protein length: 161 aa.
Product: Sorting nexin for late-Golgi enzymes, putative

>YALI0F05456g_CDS-001 MSSRAFASMEASPKKPEALQRPDIKQQSFAEIYGVPENFLEIEVRSPQTHGIARKMYTDY
EIVCRTNIPVFKLKSSVVRRRYSDFECFREILERESTRVSIPSLPGKVFTNRFSDEVIEA
RREGLEKFLQTVAGHPLLQTGSKVLCAFIQDPQWDKNQWI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG