YALI0F05434g

Overview

Description some similarities with uniprot|Q9P501 Neurospora crassa B24P11.150 Conserved hypothetical protein
Locus type CDS
Locus tag YALI0F05434g

Location

Species Yarrowia lipolytica Positions 814546..816677
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2132 (nuc.)
Previous locus YALI0F05412g Next locus YALI0F05456g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05434g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05434gYALI0F05434g_mRNA-001YALI0F05434g_CDS-001

Nucleotide sequence

 

>YALI0F05434g
ATGGCGCTTTTCAGAGTACTCACTCTCCTGAGCCTGGCTCTTCTGGGGGCAGCTCAGTAC
TCGCCAGAGGAGCTCCAGGGGTACTACGGGCTGGTGGAGCCGACCAATCGCACACAAAAC
AACTACAACTCATTCAGCCTCACGGTCGAGGGCGACTACGTGTCCAACATCCAGGCTCTG
ACGGTGGAGACCGACAAACTGGCCGGACTCAACTCGGCAGCTGCAGTCTCCGGCAACCTG
CGAATGATCAGTGGAAACTACACGGGGCCGGCGCTGGACTGGTCCAATGCGGCCCTCATC
GACTGCGACAACACCACCGACGTTATCGATGCACTCAACGAGGTGCTCATCAACAACCCG
GCTTGCATGATTCTGTACTCATTGAACTCGGACGCTTGTCACTTCACACGGCCATACAGA
GTCTTTTCGGCCGATATCGGCTTCGTGTTCACCACGGTCTCGGCCAAGGGAGCCCAGTCA
CTACTGGAAAAGGTGCAACAGTCGCCTGTTCTGCTGCATTCAGTCGCTTGGCTTAATACC
ACATCTCTACCAGATGATAATACCCCCGTGGTGGATGATAAGGGCCCCTCCAGGGATACA
AAGATCGCCATGGCCGTTCTTTACTGCATTTGCGGCGTTCTAGCACTAGCCGTCGTTGTT
CTCATTTCTCTGGGCATATGGAGAGTCCATCGTCACCCCGAACGGTACGGATTGGCTCCT
CCTGACCAGACAGATGAGGAACGCGAAATCTCCGACGATTTCAACAACGGCGGTGGCGAC
GTATACACCCCGCCTCCAACAAGAGTGGAGAAGGCCAAGGGTCTTGCACGGGCTGTTTTG
GACGCCATTCCGTTGATGCGGGTCATGATTGGAAGCCAGGAGGACGAGAAGGACAAAGGT
ACAGCTCCAGGTGAGAGTTCCAGTAGTCCGGCCATGTCCACGCATAAGCGGGATGTTTCT
AATGTCTCTGTCAAGTCTAGTTGTGACATGTCTCGAATGGAAACATTACCTGTGTACATT
CAGGAAGACGACAACTGTGCCATTTGCTTTGACAACTTTGAGGACAACCAGATCATTCGA
CAGCTTCCTTGCACGCATAGATTCCACGCCGATTGCGTGGATCATTGGTTGCTCAACTCG
TCTTCTCAGTGTCCCATGTGTCGAATGAATTTGAGAAAGGAAGAGAACGAGACAACTGAG
AACGAAGCAACCACTCCATCCACACATACACAAACGCAGACGGCGCAACCACAAACTACT
TCTCAACAGCAACCGTCAGTCATCACGGTCACTCAACGGGACCTCAACATCTCTCTGGCC
ACCCGAATCATCGACTGGTGGAACATGTTGTGCCTCCCTGAAGACGCACGAGCCGAGGCC
CGAGAACGACTCAACCACGAGTCGGAACTGCGTCGCAAAATCAGACAACTGCAGCGGTCC
GACGGTACGCTGATGCCTAACGACGGCATTGTTGCTACTGACGATGGAGCTTTAAGGGTG
TTGCTGGACAACAGACCCTTGCAAGCTCCTCCGATCGACGTTCCCTTGTCAGAGAGAATG
CTCGTTCCAGGCCCTGATCTGGATCTCAACAATGTCGAGGCTCCTGTTCCGAGGTATTCC
GTGTTACCGGACATGAGCGCAGCTTCCGAGTCGGTCTACAACCGAGACTCGGTGTCCCTG
CCCCAAGCCTGTCTTCTGCCTCAACTAGATCTGTCTGAGTTCTCTGTTGATGTGGATGGT
ATGAACACACACTACGATACGAGTACCGGTACTGGGTCTGATATCGACACTGACATTGGA
GACGTTACCAGAGTCGACACGCGTGACGCTACTACAGCTCATGTTGATGGTGACTGTGCT
TCCTATGTTGAAGATGCCAAAACTAAAGAAGCTAACGAAACTGCTTCCGACGCTCTTTAT
GACCCAGCCTCCGACACCCTCGAGCTCGAGACGCTCAGAGATGCCTCTGCCGCCTGTGAA
GACGGCCCCGCTGCTCACGGAACACACCAAGACCCCGACTTTGAATTCGACTTTGAAAAC
ACCACCCATTCTAAACCTATTTAATCCTTCTACAAGTAGACAAAGACTACAGCCAAATAT
TGCATATTAATATTCATTCTCCGTCATGCGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05434g_CDS-001

Protein length: 688 aa.
Product: Conserved hypothetical protein

>YALI0F05434g_CDS-001 MALFRVLTLLSLALLGAAQYSPEELQGYYGLVEPTNRTQNNYNSFSLTVEGDYVSNIQAL
TVETDKLAGLNSAAAVSGNLRMISGNYTGPALDWSNAALIDCDNTTDVIDALNEVLINNP
ACMILYSLNSDACHFTRPYRVFSADIGFVFTTVSAKGAQSLLEKVQQSPVLLHSVAWLNT
TSLPDDNTPVVDDKGPSRDTKIAMAVLYCICGVLALAVVVLISLGIWRVHRHPERYGLAP
PDQTDEEREISDDFNNGGGDVYTPPPTRVEKAKGLARAVLDAIPLMRVMIGSQEDEKDKG
TAPGESSSSPAMSTHKRDVSNVSVKSSCDMSRMETLPVYIQEDDNCAICFDNFEDNQIIR
QLPCTHRFHADCVDHWLLNSSSQCPMCRMNLRKEENETTENEATTPSTHTQTQTAQPQTT
SQQQPSVITVTQRDLNISLATRIIDWWNMLCLPEDARAEARERLNHESELRRKIRQLQRS
DGTLMPNDGIVATDDGALRVLLDNRPLQAPPIDVPLSERMLVPGPDLDLNNVEAPVPRYS
VLPDMSAASESVYNRDSVSLPQACLLPQLDLSEFSVDVDGMNTHYDTSTGTGSDIDTDIG
DVTRVDTRDATTAHVDGDCASYVEDAKTKEANETASDALYDPASDTLELETLRDASAACE
DGPAAHGTHQDPDFEFDFENTTHSKPI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG