YALI0F05346g

Overview

Description weakly similar to uniprot|Q00858 Fusarium solani Cutinase gene palindrome-binding protein
Locus type CDS
Locus tag YALI0F05346g

Location

Species Yarrowia lipolytica Positions 798995..801370
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2376 (nuc.)
Previous locus YALI0F05324g Next locus YALI0F05366r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05346g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05346gYALI0F05346g_mRNA-001YALI0F05346g_CDS-001

Nucleotide sequence

 

>YALI0F05346g
ATGACGACATTCAACCCCAACGATATGGGCCATGGAGGGCCCGAGATGCACTTTGTGCCC
GGGATGGATGATCCTTCTCTCTACCAGCACAATATGCTCGACCTTAGCCATCCATTGGAC
CTGCAGTACTCATCCCGGCTCATGGGCTTTCCCAACTACGACTCCATGAACGACCATATG
GACCCGAGCCAGCTGCCTCCCACAATCGCACCAATGGACGCCTACAACGACCCCACCTAC
ATCCCAGAAGACTCGCAACTGCTGGGCTCATCCATGCCCATGCGAACCGACTCGGCCACG
TCCGATGACAGCGCTTCCCGGGGCTTGCTCTCCAATGCCTACTCGTCTGCAACGTCGCAA
TCGTCGCAGACACCCCCCATTCAACGAGAGCCCGGATACATGAACCCCACCGCCATGGTG
GACCAAGTGCTGGAGGGCACGATTTCTTCTTCTAACACCAAGCAATCCATTCCCCCTGTC
GATGCTGTCCCCCAATCCGTGCCTAGAAAGGCTGTCGAGGCCTCCATTTCTGCCCGACCG
GACGAAATTGCCGATGCCATCTTCCTGGTGAACCCTACGGGGAAAATTGTTCACTGTAAC
ACTATTGTTTCCACCCTGCTGGGTTGGTCCAAAGATAAACTTGTCGGGGCAGACATTCGA
ACGACTTTGCATCCCGAGGATGTCAACAAGTGAGTATTTATTGTCGTTACGCTATTATAT
TTGATGTTATGCAAGCATGTCTGGTTGGTCGTTCCGGACCCCAGTCCTCTCTTCGCGCCT
GAAAAAAGAAAAAGGATAAACAATCCCATGTGACCCGTTCTTGCTTGATTTGAATCACAC
CGAACACAACTCTTGTTTGCTACCATCGAGGTGGTTTATTATGGCTGGTGCTATTTGTTG
CTCTTACTCAGATGTCTTTGTTTCACAAGACCTATTTTGTTTCTATGTCTCTTCTTCATT
TTGTGATATTGTTACTCTTTTATTCTTCCGGCATGTTTTTTACCTGTTTTATCTGAAAAA
AACACCGGGATACCCCCCCTCAACCCTCAACACTTTTACTGATATTCCACTTCAACTCCT
TACAAGAACGGCTTAAGGCTATTGTTTGATTGCAGCGCAGGCTTGTATGTCTCTCAGGCT
TGCTGTGCGTCCCATGTGCGCTTTACTCTGTGTGCTACTACTGTACGCTATCTCTGTGCT
ACATTGAATAGCAACTTTGTCCCCATGCTGCTTGCATTGTTTTATCCTTCTCTCCCTATT
CTCCTTCAACCTGTAAAGTCTCATTTCTCCCCTTATTCCTTTTCTTTCCTGTTACCCTTT
TCTTCCCTCCACTTCCACATGAGTCTAGACATCGAAAACGCTTAGTCTTCTGGTTGTCGT
TTCACGTTCCAACGCATTTGCTCGTGTTTACATTCTTGTTTCTACCACACTCCTCACACT
ACTCTCCAAAAGTGCATGAACACTACTAACCTCCCAGTTTTTATAATACCCTCCATGATG
CCGTAACGCGCTCTCGAAAGTTCAAATCACATACCCGTTTTTCCAAGGTCGGGGGTTCTG
CGCCCGTCTTTGAGCTTTTCGAGGTGATTGGCACGCCATACTCCTCAGACCTGGCCGACT
CCGCTACACTTGATTCCTCGCAATCCGAATGCCGAGGCGTGGTGCTCAACTGCCGGCCCT
ACCCCAGCCAACAGGCGGCTCAATTCGACGGCTTCTTGCAGCTGAGCTCCGACAACCTGT
GGCTGAAGCGCCAGCTGAACCGCGTGAGCACCAATCTAACGCCTGAGGCGGTGTCTTTTA
ACGACGCCAGCGCCCGGCTTAAGGGACCTCCCGGAGTCTCCGAATGGGTGGATGATATGA
TGCACATGTCATCCGAGAGTGGTTGGGGCTCTCCTGCCTCAGACGCCTCGGATGCCCAGG
ATCCTCCAGACCTACTTAAATTTTACTATCCCGATCGTACTGACGAGGCCAACAAGGTCG
TGACCTCCGCACCGTCTTCCACCTCCACGGGCTCCAACAGGCCCAGCAAGAAGGATAAGC
GGGTGCGTAAGCCCACCTCCAAGACCAAGGAGGGCGACTACATCTGCACCGAGTGCGGCA
CCATGAACTCTCCTGAGTGGAGAAAGGGTCCCCAGGGCCGAAAGACCCTGTGTAATGCTT
GCGGACTGAGATGGTCTAAGCAGGCCAAGAAGCAGCAGCAGCAGGCGCATTAGAGGTCGC
ACGAGCCACGTGACTGGCGCCGGAAGTTGCTGCCGCAACAGTCTTGCCGCTCCTCTCTTC
TCCAAAGGGACCCTGAACATGTAGTAGCCCCGCATTCTATTTCCTACATTCATGATCTAT
CAGGGAATATAGTATTTATTCATTAGTGTTGACACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05346g_CDS-001

Protein length: 475 aa.
Product: Conserved hypothetical protein

>YALI0F05346g_CDS-001 MTTFNPNDMGHGGPEMHFVPGMDDPSLYQHNMLDLSHPLDLQYSSRLMGFPNYDSMNDHM
DPSQLPPTIAPMDAYNDPTYIPEDSQLLGSSMPMRTDSATSDDSASRGLLSNAYSSATSQ
SSQTPPIQREPGYMNPTAMVDQVLEGTISSSNTKQSIPPVDAVPQSVPRKAVEASISARP
DEIADAIFLVNPTGKIVHCNTIVSTLLGWSKDKLVGADIRTTLHPEDVNNFYNTLHDAVT
RSRKFKSHTRFSKVGGSAPVFELFEVIGTPYSSDLADSATLDSSQSECRGVVLNCRPYPS
QQAAQFDGFLQLSSDNLWLKRQLNRVSTNLTPEAVSFNDASARLKGPPGVSEWVDDMMHM
SSESGWGSPASDASDAQDPPDLLKFYYPDRTDEANKVVTSAPSSTSTGSNRPSKKDKRVR
KPTSKTKEGDYICTECGTMNSPEWRKGPQGRKTLCNACGLRWSKQAKKQQQQAH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG