YALI0F05324g

Overview

Description similar to uniprot|P40482 Saccharomyces cerevisiae ANU1 SEC24 YIL109C (ohnolog of YNL049C) Component of the Sec23p-Sec24p heterodimeric complex of the COPII vesicle coat
Locus type CDS
Locus tag YALI0F05324g

Location

Species Yarrowia lipolytica Positions 790821..794263
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3443 (nuc.)
Previous locus YALI0F05302g Next locus YALI0F05346g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05324g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05324gYALI0F05324g_mRNA-001YALI0F05324g_CDS-001

Nucleotide sequence

 

>YALI0F05324g
GGTGAGTAACAAGTGGACTAGGAGACGGTGAGTCCATTGACTTGAGATGAACGGAGGATG
ACAAGTGACACAGAATGAGTCGCATCAAAACCACACCTTCAATTGCCATCTACAGCTGCA
AAGGTGTCATATATGGGGACAACCTGGTGCGACACGATTTGTGACACGGACTCAGAGAAG
GACACAACGACACAGATCAAAAGGTGGCTGATCGGACACAAGCAAAATATTGATTCTACA
CGAACGCAATCATCACCAAAACCACTTTCGGAATTGATGGTTTTGCTATAATACCGTCAT
GTGCAGCGTCTGTGCCTGTGTCTGATGTCGGGTTTGATGTGCCACAAACAGGATCCCGCG
ATCTTTCGTCGCATCAGATGGGACGATCTTGTCCGCTCGAGATCTATGGCCTTTCACCAC
CGCGACTGCGTCGTCACATTTCCCGTCCGTGCCTGCAGCCACTCACCAATACCTTGACTA
ACCCAGATGAGCCAAGAACACCCCGAACAGGGCTCTTCGTCCAAGCGACGGGTCTACCCC
CAGCAACAGTATGACTTCGCCGCGGCCCAGCCCGCCGGCTACTCGATGCCCGACCCCACC
CAGCCCTACGGAGCCTCCGCCTCTCCCAGTGCTGCCATGTACGGTGGAGCTCATGCCATT
CCCTCGCCCGCAGCTTTCCAGCCCCACACCGCCAACGTGCAGTCTGGCGCGTTCGCTCCT
CCCCCCGGGACTCCCGGATCGGCCGTGGATCCTCCCGTGGCCCCCGGTGTGGCTGGAGGA
ATGGCCTACGGCGCCCCCCAGGCCGCTGGAGCCGCGTACGGCTACCAGGGTCTTACCAAC
CAGATGGGCAACCTCAACATTGGCGGCGGCGGCGCCTACCAAGGAGGTGCTCCACCCGGA
GCGGCTGGCGGAGCTCACATGGCTGCCCCGACCCAGCTCAACCAGATCTACAACACCGAT
CTGCTGCAGAACTTCCCCCCTCCCATTTCCGATCTCACCCTGCCTCCCCCTCCCGTGATC
TTGCCCCCCGGATCCTCGGTGACTGGCAACCCCGATCCCAACGCTGACTCGGAGTTCATG
CGATGCACCCTCAACACCGTGCCTACATCGTCGTCGCTGCTCAAAAAGTCCAAGTTGCCG
TTTGCATTGGTCATCCGACCCTACACTGCGCTGCGAGATGCCGACGAGAATGTCCCCACC
GTGGCCGACACCACCATTGCTCGATGCCGACGATGTCGGTCCTACATCAACCCCTATGTT
GTCTTTTTGGAGGGTGGCGCTCGATGGCGGTGCAACATGTGCAACCTGACCAACGATGTG
CCCTCTGGCTTTGACTATGATGCCGTGGCCAACAAGCCCCGAGACCGATGGTCCCGAGCG
GAGCTCAACCACTCTGTCGTTGAGTTCGTGGCTCCCGCAGAGTACATGGTGCGACCTCCT
CAGCCTCTGGTCTACGTGTTCGTTCTGGATGTGTCTGTGCACTCTGTCAAGAACGGTCTG
CTGGCCACCGCTGCGCGAACCATCAAGGAGTCGCTATCACGAATCCCCAACGTGGATAAC
CGAACCCGAGTCGGTTTCCTCGCAGTCGACTCGTCGCTGCACTACTTCGCCATTCCCCGA
AAGGAGGACGTGGCGGAGGGCGAGGGCGAAGAGGGAGAGGAGAACGAGTGGCCCGAGCCC
CGGATGATGGTTGTCTCCGACATTGACGACCCCTTCCTCCCCATGCCTACCGACCTGCTG
GTTAATCTCTCCCAGTGCAAGGGCGGCATTGAAAAGCTGCTGGATTCTCTGCAGTCCATG
TTTGCTCACACAGTCAACCCCGCCTCGGCTCTGGGATCTGCTGTCGTGGCTGCTCACAAG
CTCATTGCCAACATTGGCGGTAAGATTGTGTGTCTGACCTCTACCCTCCCCAACGTTGGA
CAGGGCAAGCTCGAGGTTCGAGATGACAAGAAGGCTCTGGGTACCTCGCGAGAGGGCCAG
ATGCTCCAGACAGCCTCCACCTTCTACAAATCGTTTGCCGTGGAGTGCTCCAAGACTCAG
GTGACCGTGGACATGTTCCTGTTCTCCTCTCACTACCAGGACGTTGCATCTCTCTCCAAC
CTGCCCCGATTCTCCGCCGGTCAGACTTACTTCTACCCTGGCTGGATTGCCTCAAACCCT
GAGGACGCCAACAAATTTGCTCTGGAGTTCTCCGAGTACCTGTCTCAGGAGTTGGCTACC
GAGGCCGTTCTGCGAGTGCGATCTTGCGACGGTATTCGAATGAGCGCCTTCTACGGCAAC
TTCTTCTCCCGATCTTCGGATCTGTGCTCTTTCTCCACTTTCCCTCGAGATCAGAGCTAC
GTGATTGAGGTCAATATTGAGGAGACGATTGTCAAGCCCTGGGTGACTTTCCAGGCCGCT
ATTCTGCACAGCACTGCCTCTGGCGAGCGACGCATCCGAGTCATCACCCGGGCCTTCCCC
ACCTCGGCTCTGCTGCAGGACATTTACGCGTCTGCTGACCAGATCGCTATCACCACTTAC
CTTGCCAACAAGGCAGTGGAGAAGGCTCTGCAAAAGGGTCCTCAGGACGCACGGGATTTG
CTCATGAACCGACTCAACGAGATGTTCACCTGCTACAAGAAGGATTTGATGACCACCAAC
GTCGGCGCCTCCGCCCCCCTGCAGTTCTGCACCAACCTGCGAATGCTGCCTCTGCTGGTG
AACGCTCTGATCAAGCACATTGGTTTCCGAAAGACCTCGCAGATCCCCTCGGATCTGCGG
TCTGCGGCCCTGTGTCTCCTGTCGACCCTGCCCGACAAGTACCTGATCCAGTACATTTAT
CCCAACTTTTACAACCTCATCTTCATGCCCGATGAAGCTGGTCTGCCTGACGCCGAGACC
GGCCAGATTGTCATGCCTCCCTGCACAAACCTCAGTGGCGAGCATCTGATCAGCCATGGT
CTGTTCCTCATTGACGACGGCCAGGTCATGTTCCTGTGGGTAGGCCGGGATGCACAGCCT
GCACTGTTGCAGGACGTGTTTGGCGTGTCTTCCATCACCGAGGTGCCCACAGGCAAGACA
GAACTGCCCGTGCTGGACAACCAGTTCAACGAGCGAATCCGAAACATCATTTCCAAGGCT
CGAGAAAAGACAGATGCCATCACCTACCAGCATCTGTACGTGGTGCGGGAGGACGGCGAG
CCTGCTCTGCGACTGTGGGCCACCACCCATCTGGTCGAGGACCGAGTGGAGCAGAGCGGC
GTCACTTACCATCAGTTCCTCACCTCCATTCGGGAGAAGCTGAACTCTTAGATGTAAAAT
GTATTAATAACGAATGGCTGTTTGATCACCTGGCACAGGTTGAGGATTTGTACGAATGAT
GCCAGTCAGTCCATGAACTGGAATGGTTAATGGTACGTACATGTAGAAGCATGGCGTACA
TTGTAATACATCATAATAATACG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05324g_CDS-001

Protein length: 935 aa.
Product: Component of the Sec23p-Sec24p heterodimer of the COPII vesicle coat, putative

>YALI0F05324g_CDS-001 MSQEHPEQGSSSKRRVYPQQQYDFAAAQPAGYSMPDPTQPYGASASPSAAMYGGAHAIPS
PAAFQPHTANVQSGAFAPPPGTPGSAVDPPVAPGVAGGMAYGAPQAAGAAYGYQGLTNQM
GNLNIGGGGAYQGGAPPGAAGGAHMAAPTQLNQIYNTDLLQNFPPPISDLTLPPPPVILP
PGSSVTGNPDPNADSEFMRCTLNTVPTSSSLLKKSKLPFALVIRPYTALRDADENVPTVA
DTTIARCRRCRSYINPYVVFLEGGARWRCNMCNLTNDVPSGFDYDAVANKPRDRWSRAEL
NHSVVEFVAPAEYMVRPPQPLVYVFVLDVSVHSVKNGLLATAARTIKESLSRIPNVDNRT
RVGFLAVDSSLHYFAIPRKEDVAEGEGEEGEENEWPEPRMMVVSDIDDPFLPMPTDLLVN
LSQCKGGIEKLLDSLQSMFAHTVNPASALGSAVVAAHKLIANIGGKIVCLTSTLPNVGQG
KLEVRDDKKALGTSREGQMLQTASTFYKSFAVECSKTQVTVDMFLFSSHYQDVASLSNLP
RFSAGQTYFYPGWIASNPEDANKFALEFSEYLSQELATEAVLRVRSCDGIRMSAFYGNFF
SRSSDLCSFSTFPRDQSYVIEVNIEETIVKPWVTFQAAILHSTASGERRIRVITRAFPTS
ALLQDIYASADQIAITTYLANKAVEKALQKGPQDARDLLMNRLNEMFTCYKKDLMTTNVG
ASAPLQFCTNLRMLPLLVNALIKHIGFRKTSQIPSDLRSAALCLLSTLPDKYLIQYIYPN
FYNLIFMPDEAGLPDAETGQIVMPPCTNLSGEHLISHGLFLIDDGQVMFLWVGRDAQPAL
LQDVFGVSSITEVPTGKTELPVLDNQFNERIRNIISKAREKTDAITYQHLYVVREDGEPA
LRLWATTHLVEDRVEQSGVTYHQFLTSIREKLNS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG