YALI0F05280g

Overview

Description weakly similar to uniprot|P53951 Saccharomyces cerevisiae YNL051w COD4 protein (Complexed with DOR1 protein 4)
Locus type CDS
Locus tag YALI0F05280g

Location

Species Yarrowia lipolytica Positions 788385..789714
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1330 (nuc.)
Previous locus YALI0F05258g Next locus YALI0F05302g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05280g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05280gYALI0F05280g_mRNA-001YALI0F05280g_CDS-001

Nucleotide sequence

 

>YALI0F05280g
ATGCTCGACATTGACCAGTTTCTGGACGCAGAATTCGACCCTGTGGCCTACGCCAACCAG
CTGGTGCTGCAGACATCGTCGTCACGTGATGAGGACATTGATCTCGACATCCCCATCAAG
AAAATATCCTACGACGTACAGCATCTCGACGACCAGGTACGCACGTTATGCAGAGACAAT
CACAAGGAGCTGCTGTCACGTGTAGCTGATGTAAGCACCAAGGAGGACACGCTCAAGGCT
CTGGAAACGCCCATGAAGGATGTCAATTCGTCATACAAAAAGTTGCAGACAGATGTTCTG
GGTCCTTACTACCAAGCAGACAATCTTTACTCGGCTCTCAAACGGGTTCACCATACCACC
GATCTGCTCAGATCGCTCACCTGGTACCTCTACCTGGCTGTACAACTCAACAACACATCA
GATATGGCTGGATCAGCTTCTCTGATTCGAGATTTACACACCCATTCGAAAATCCATCCC
GGTCTAGCATCTTTACAGATCTTCAGAGACCATCAGAAGTTACTGAAGGAGGCTGATAAG
AAACTGACACTGAGATGCGTTTCTTCAATCAAGAGTGTGTCTTCAGTGTCGACTTCGGCC
GAAAGAACCGCCATCTCTTCAGCTATTGTCGGTCTAGCCATCTTAGACGAACGTCAACTT
GCGTCGGCCGTCCAATCAGCGCTGTCCAACTACATTTCACAGTCAATTTCTCTTCTGGCG
CGCTCAGTCAACTCAGACGAGTCGCTGGAACACGCCATGCATACAATTAGTCAGCACTCT
CGAGCAGTGTCGACATTGGGCACTCTGCTGTCACGTGCCGTGGTACCTGCAGAAGGAGAC
GACAAGTCTGCTACACCTGTCTCTGAGCTGCCTCGAATCGCGGATCTGCTTGATTCTAAC
CTCAACTCAAAATTCTGGCGAGATGTGGCTTCCGCTCTAAACCTGAGAATCAAGGAGAGA
ATCACCCGCGCCACTCCGGGACTCAAGAGTCTGCAACAGAACCATGCGAGATTGGAAACT
GTGGTTGCAGAGGCTGTCAGTAGAGGTGGCGGAGGATTGACGGTAGATGGAATGGAGGCT
AAGGTGATGAAGGGTGCGCTGGCGCCTCTAAAGTAGGAAGCGAACGACGGAAGGGTCGTG
AGCTGACAACAACCAAGAAAAGAACGACTATAGGTCATGAATGGCACAGTCGATGGTACC
AATTGAGGTCTAGCCTTCCCTCAATAAGTCAACAAGAGTTGCCTGTCTCCGCACAGCTGA
CAATATATTGCATTAACCAACATATACTGTAGGAGACAAACACCCGTACATACCAAAAGT
GTCGTGAGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05280g_CDS-001

Protein length: 372 aa.
Product: Conserved hypothetical protein

>YALI0F05280g_CDS-001 MLDIDQFLDAEFDPVAYANQLVLQTSSSRDEDIDLDIPIKKISYDVQHLDDQVRTLCRDN
HKELLSRVADVSTKEDTLKALETPMKDVNSSYKKLQTDVLGPYYQADNLYSALKRVHHTT
DLLRSLTWYLYLAVQLNNTSDMAGSASLIRDLHTHSKIHPGLASLQIFRDHQKLLKEADK
KLTLRCVSSIKSVSSVSTSAERTAISSAIVGLAILDERQLASAVQSALSNYISQSISLLA
RSVNSDESLEHAMHTISQHSRAVSTLGTLLSRAVVPAEGDDKSATPVSELPRIADLLDSN
LNSKFWRDVASALNLRIKERITRATPGLKSLQQNHARLETVVAEAVSRGGGGLTVDGMEA
KVMKGALAPLK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG