YALI0F05214g - TPI1

Overview

Description uniprot|Q6C2T9 Yarrowia lipolytica YALI0F05214g TPI1 Triose-phosphate isomerase
Locus type CDS
Gene name TPI1
Locus tag YALI0F05214g

Location

Species Yarrowia lipolytica Positions 783807..784734
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 928 (nuc.)
Previous locus YALI0F05192g Next locus YALI0F05236g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05214g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05214gYALI0F05214g_mRNA-001YALI0F05214g_CDS-001

Nucleotide sequence

 

>YALI0F05214g
ATGGTGAGTGATTGAGGAGACAATTGGCCGGCGGTCAATTGAGCGACACAAAACCCCGCG
CGCGCACGCACTAACACAGTCTCGAACCTTTTTTGTTGGCGGAAACTTCAAGATGAACGG
CTCTCTGGAGTCCATCAAGGCCATTGTTGAGCGACTCAACGCCTCCGAGCTCGACCCCAA
GACCGAGGTGGTCATCTCGCCCCCCTTCCCCTACCTCCTGCTCGCCAAGGAGTCTCTGAA
GAAGCCCACCGTGTCTGTGGCTGGCCAGAACTCTTTCGACAAGGGAGACGGTGCCTTCAC
CGGTGAGGTGTCTGTGGCCCAGCTCAAGGACGTTGGAGCCAAGTGGGTCATTCTCGGCCA
CTCCGAGCGACGAACCATCAACAAGGAGTCCTCCGAGTGGATTGCCGACAAGACCAAGTA
CGCTCTTGACAACGGTCTCGACGTCATCCTCTGTATCGGAGAGACCATTGACGAGAAGAA
GGCTGGCAAGACCCTGGACGTTGTCCGATCCCAGCTCGACCCCGTCATCGCCAAGATCAA
GGACTGGTCCAACGTGGTCATTGCCTACGAGCCCGTCTGGGCCATCGGTACCGGTCTCGC
TGCCACCGCCGAGGACGCCCAGCAGATCCACCACGAGATCCGAGCCTACCTCAAGGACAA
GATTGGCGCCCAGGCCGACAAGGTCCGAATCATCTACGGTGGTTCCGTCAACGGCAAGAA
CTCTGGTACCTTCAAGGACAAGTCTGATGTCGACGGTTTCCTCGTCGGTGGTGCTTCTCT
CAAGCCCGAGTTTGTTGACATCATCAACTCTCGACTTTAAGCATTTCAGTGCGATTCGAG
TGAGTAGCACGATAATAGCCCGTGTCCATGTGCTTTAACACGTGTGCTGTGCTATTTGAA
TATATCTTATGAATGATACATGTAAGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05214g_CDS-001

Protein length: 248 aa.
Product: Triose-phosphate isomerase
Gene: TPI1

>YALI0F05214g_CDS-001 MSRTFFVGGNFKMNGSLESIKAIVERLNASELDPKTEVVISPPFPYLLLAKESLKKPTVS
VAGQNSFDKGDGAFTGEVSVAQLKDVGAKWVILGHSERRTINKESSEWIADKTKYALDNG
LDVILCIGETIDEKKAGKTLDVVRSQLDPVIAKIKDWSNVVIAYEPVWAIGTGLAATAED
AQQIHHEIRAYLKDKIGAQADKVRIIYGGSVNGKNSGTFKDKSDVDGFLVGGASLKPEFV
DIINSRL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG