YALI0F05126g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F05126g

Location

Species Yarrowia lipolytica Positions 772238..774657
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2420 (nuc.)
Previous locus YALI0F05104g Next locus YALI0F05148g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05126g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05126gYALI0F05126g_mRNA-001YALI0F05126g_CDS-001

Nucleotide sequence

 

>YALI0F05126g
ATGTCCGAATTGGAACACCCCGATTACGCCAACCAGATGGCGGAAATGAACTCGTTTCTC
AACCTGCACACCAACAGCCCCGACCATCACCAGCTCGGCGACGCCTCGGCGGCCCTCAAA
CGCCAGACCCACAGTTACCCGAACTCGGTGTCGCCCTCGTCGCCCTCCGTGCACTCCATG
TCCCTGGTAGGAACCCCCAAGATGAACTACGACGACATGGCTTTCCAGAAGGGACAGCAA
ACACAAAACCAACAGCAGGGCCAGACCCAGGGCCAAGGTCAGCAGCAGCAGCAGCAGCAT
CATCAACATCAGCAACAGGGCCACCCACAACACCAAAACCAACACCAATCACATCACAAC
GGGACCGGGCAACACAACAATCCCCACAACGGCGGCCGGTTTGAAGACTACTCCTTCTGG
AACGACTTTATCGACGATGACCGCAACTCGCCGGCCGCAACCACCACCCATAACTCCCAC
GTTAGCCCAACAACCACACTGCCGTCACAGGCCAAGCCCCAGACCCACCGGTCGCCAGCA
AACCTGACTCCTCCAGGCCAGCCGCCACAAAAGTACAGTGGTAATGGGGGAAACAACGGC
TCCAACGGAAACAATGCGAGATACCCGTTTGAAATGAAGGTACCTGGAATCACCCCTAAC
GAGATCTTCCACTCGCCGCTGTCGGAGCCCATGGACCCCCAGAACCAGAACCTGGCCAAC
GTCTACGACGATGGATCTTTCACGCCGCTGGTATCCCCAGCAGTATCGTCCTTTGATCCT
CCCATGAGTGGCCACTCGCTCAATTTCGCCATGCCGAATGCCTTCCTGTCCCTGGAGCCC
TCAGATGGACACCCTGGTGTCATGATGCAGCAGCAGCAACAGCAGTATGACGATAAGAAG
GGCGGATCGGCATCTGCACCCTCTTCGGCAACGCGAAAAAGAAACTCTGTGGCCGGACGA
GCTGCTGCTCCTCGAGGAGGAAAGGCTCGGTCCGGAAGAGCCACTCCAGTCGGAGGCACC
CCCGTGATGGGTCCTCAATCTGGAGCATCATCCGTGGCTGGCCGGGTGGCCAAAATGTCG
CCGATGACCCGACCCACCGGTCGAGCAAGTGCCCGGGCAGGATCTCTTTCAGGCCCCAAC
TCCGTGGGAGGTTCTCCATTGGTGAACCCTTTGGTGTCTGCTTCCGGAAACAAAGACTCG
TGGTCCTCAGACAGCATTTCACCCGAGTCGTTGCCGGACATTGTCATGCCACCTCCGCAA
ACCCGGTCGTCGGTTTCGTCGTCGTCTTCTTCGGGTCACATGAAACCGGCCACTCCCTCA
ACTCTAATGGACCTCCCTAAGGGCCAGAACGAGGACATTGATATGAAGGACGCCAACAGC
GCGCTGGAGGACGCCATCCGAGTGACTCGTAACCTGACTTCTTCGCGGTCGTCTGTTTCA
CTGGCGTCCACCGGTGCCACTCCTCTCATGAGCGACGCCAACATCTCGCCAAACACAAAC
ATCAGTAGTGTCTCGTCGACACCTCAGATTGCTGCCAAGAAACAACAGCAGCAGCATAGT
GGCAAGAAGGGCAGCATCAGTGGTAGCAGCAATGGAGGCAGCAGCAGTGGAGGAAACGGC
CCTGGTAGCAGTAAGATTGCGCCCCAGCCTCCTTCGCGACGATCCTCTTCCGTGTCTGCC
TCGCCAGCACTCATGCCCAAGATCTCTCCTCAAATCAAGCCCATGATGTCCGAGGGCTCG
TCCCTGGACTACCAGACGCTTCTGGCGACAAAGTCCAACTATCAGAACATTGTTGAGGGC
AAGCACAACGCTCTGGGACTCCAATATCCTGAGCATCTGAGTGTGAACATTGCCTCCAAA
CGCACTTCGCACAAGCTGGCGGAACAAGGCCGACGAAACCGAATCAACAACGCGCTTGCC
GATCTCGGAAAGTTGCTTGTGCCCGAGTCGGCGTCTACATCTAAGGCCAACACCGTCGAG
AACGCCATTGACTACATTCGCAAACTCAAGACGGAGCTGGTCGAGGTGACCACCAAAGCC
GATCGTCTGCAGGCATTCCTTCAGGCCAAGGGTCTGTCCGACGAGTTCGAAGCGACCATG
GGGGTGTTGGTCAAGGAGGAGGATAAGAACTGGCAAGGCGCTGAATCCTAGGGGGGAAGC
CGAGGCTGACACCTAGCTAGCGCCAGAGATGCAGCATGCAGCCAGGTATTGGTATTTATA
TTTATTACAGTAATGGAGAGAAAAAATACGAGTGTGGTGTAGACAGTTCATCAGCGCATA
ACGTACAGCAGATAGTACATACAATGCAGAGGGATGATACGGATACTAGAAGGGAACTGA
ATTACTGCACTCTTTTTGATCAACTTGATATCTGCCTGTGGTGTATCTCTTTTTCATTTA
TTCTAACATCTGTTCACCAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05126g_CDS-001

Protein length: 717 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F05126g_CDS-001 MSELEHPDYANQMAEMNSFLNLHTNSPDHHQLGDASAALKRQTHSYPNSVSPSSPSVHSM
SLVGTPKMNYDDMAFQKGQQTQNQQQGQTQGQGQQQQQQHHQHQQQGHPQHQNQHQSHHN
GTGQHNNPHNGGRFEDYSFWNDFIDDDRNSPAATTTHNSHVSPTTTLPSQAKPQTHRSPA
NLTPPGQPPQKYSGNGGNNGSNGNNARYPFEMKVPGITPNEIFHSPLSEPMDPQNQNLAN
VYDDGSFTPLVSPAVSSFDPPMSGHSLNFAMPNAFLSLEPSDGHPGVMMQQQQQQYDDKK
GGSASAPSSATRKRNSVAGRAAAPRGGKARSGRATPVGGTPVMGPQSGASSVAGRVAKMS
PMTRPTGRASARAGSLSGPNSVGGSPLVNPLVSASGNKDSWSSDSISPESLPDIVMPPPQ
TRSSVSSSSSSGHMKPATPSTLMDLPKGQNEDIDMKDANSALEDAIRVTRNLTSSRSSVS
LASTGATPLMSDANISPNTNISSVSSTPQIAAKKQQQQHSGKKGSISGSSNGGSSSGGNG
PGSSKIAPQPPSRRSSSVSASPALMPKISPQIKPMMSEGSSLDYQTLLATKSNYQNIVEG
KHNALGLQYPEHLSVNIASKRTSHKLAEQGRRNRINNALADLGKLLVPESASTSKANTVE
NAIDYIRKLKTELVEVTTKADRLQAFLQAKGLSDEFEATMGVLVKEEDKNWQGAES*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG