YALI0F04884g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F04884g

Location

Species Yarrowia lipolytica Positions 746772..750342
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3571 (nuc.)
Previous locus YALI0F04840r Next locus YALI0F04906g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04884g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04884gYALI0F04884g_mRNA-001YALI0F04884g_CDS-001

Nucleotide sequence

 

>YALI0F04884g
ATGCAGATATTTTTTGAATCTGAATTTTTCGGACTGATAAATTCCACTTATCAACTAACA
CCACTCGACAAGATGCTCCGAGCCAGTAAAGCGGTTCGAGTGAGCAGATCGGGACTGTCG
GAGTCCTTGCGGATGCTGCCACCCCAAGTCCGCTCGGTTTCAACCCAGCTAGTTCGCAAC
AGTGGTGCTAAAAGAAAGACCGCCACCAACACTGTGGCCAAGCAGAGACCCGCCAAGTGG
GGCTCCAGAAAGCCCACGCCCGCTCAGATTGAGGAGAGCAAGCAGCAGTGGCTGGCGGCC
CGAGAAAAGGCAAAATTTGGCAAACTTGCAGCTAAATTGGCCGAGATGAAAAGCGCCCGA
CAACAGAAACAGCCCGACGACGGTCGACAGAAGGTCGATCCCGTGACCCCCGAACAACGA
CAGCTACTGGATCTGATCCAGGGACCCCTGGTTACCGTGCAGGGAGACGCTAAGGCCCAC
AGAAACTTTCTCACCAGCACTCTGAGACGGATCACACCGTACGTCGATGAGGGAGGCTCC
AGTTTGATTGAAAAGGGAAGGTTCGACTTCATCACTGGCCGTCACGTGGTCAAGTCGCAG
CTAGAGGATCTTTGTAACCTCGATGACGCCCAAAAAAGCTTGGATCCCGCTTCACACAGG
ATCCCCCTGGTATTCGACGACCGCGGAAACGCTCTGAGACTTTCAGTGACGGGGTTTTTC
AAGCTCCGAAATGAGACTCGTAAAGGCAGGTACACTCTGCCGCTCCTGCAGCAGATCAAC
ATGCCTGTGCGGTTCGAGAGCCACCGAGACTTGTTGTTGAAGGTTTTGGAAGAGGAGGTG
CAGTTTCAGATTGAGCAGGAGAAAATCTATCAAGCCCGTCTGGAGAGCTTGAAGTCCTTG
TCTGAGGGTAAAGAGAAGCTCTCTGAGGAAGATGTGGCTCGCTACAAGGAGATTCAGCAG
ACTCACGTTTCTGCTCAGAGTGAAATCCTGCGAGTTCTTGCCAAGATGGGCCATATCGTG
GCATGTGACAACTTTGATGCGTTGTTGAAGCCTGCCATTTTGCAGCATATCATCACTGAC
GGTTCCGAGACGGTTCATTTATTAAATTTGAAGGATCCCTTGAGTCGGTCGATCAAAATC
AACTATAACAAGTTTCTGTCTCGAGAAGGAGGCCAACTGGATCTCCCACAGGCTGCTGTG
ACCGATGGAACGCGTGTCTACGCCAAGTACGCCAAGGGAGTGGTTGTTTTCCCCTTCTAC
AAGTTGTCTGGTGTGCAGCTGATTGAGATTTTGAAAAAGGTCGTGTTTGCAGAATTCGAG
CGCATCCGAACCCAGTACGGCATTGAGGAGGACGAGCTGATGGCCCAGCTGCAGATTATG
GCCGACAGAGGCGACAACTATCTCAAGTTTTACCCCGAGAAACCCATCTCCGCGGTCGAT
GAAGTCACGGGACTTGTGCTCGACGAAACGGCTGGTGCTGCTGCTGAGGATGACGAGCTG
AAGATCTCGTTTTTCAAAATCCATGAGACCGAGAAGGAGAAGTACTTCTCCACGAAAGCC
GCGGTGCGAACCGACATGGGGCTTCCTGAGGAGCAGGAGAGCGAGTTTGAGTCGGTTTCT
ACCGCAGTCCAGAATTCGACCTACGAGGATGTTGTTTCTGAGCTTGAGAGACTTCGTCCG
GAGTCCATTGTGGTTGCCAGAAAGACCTGGGATGGAATTTCACAGACTATTGAAAAGAAT
ATCCTGGTTGACGACCTCAGACAGTACATCCGAGACTGGAGTAAGGAGAACAAGATTCCG
TTTCCCACCACTCGTCTTCTAAAGGCGGATTTGATCCATCTACTCCGAGACCGCGTCTGG
AAGATCACGCTCACCGATTCTGTGCCCAACAATGTAGTTTCCCAAACCTTCAAGCTCTCC
GAACTCCAGAAAATCTTCCTCTTCAAGTACCACTACCAGCTGGTGCAGTTGTGGGTGACC
CGGGGCGCGGAAGTGTCTTTTGCTGACGAAAAAAATGACGAAATTGTTGTTTCTGCGCCG
GAGAAGATCCTCAGAATGGTCAGCGTGACTCTGTCGCAGTTTGGCTCTCGTATCACCTGT
GCCAAGCTCGACATGACGAAATCACAGCTCTCCAACATGACTCCCGAGCTGTGGAAGAGT
CTGCAGGAGTCCACTGAGACTCACATTGTCCATACTGACTCTGACGTTCTCGTCTACTAT
CTGGGAAACGCTCAGAAGAAAACCAAGCTGCTCAGTCGGTACATTCGGGCCATGAGCCCT
CAGGGACACTTCTCGCAGAGCATCATTTACCAAACCAACCCCGAGAGTGTGGAAAAGTCT
GCCTTTTTCCCTAGAGCCGTGTCGCATGAACAGCCCTGGTACCAGAGAGTGATCAAGAAG
TGGGCCCGATGGCGAGAGATTCACGGATCAGACTATCTCAGCAACACCCAGGAGCCCAAG
CTGTCGCTGGTGTCTTCTTCGGGAGTGTCGGACCTACCTTCAGACCAGTCTCTTCAGAAC
ATCATCTCGGACACCCTCATCACCCAGCTGGAAGCTCTACCTAGCTCGATAGTGACCCAG
GACGCGTCTCAGGTGGTAGACTCGGCCGACCAGCGACAGCTGAGCGACAGACTGGCCCAT
AAAGCTATTCTGGCGGGCGTGGTGGAACCCTATGATCCGGCAGCCAACAATGTCGCTCCC
ACCGTCTACGAAAAGGTGTCGATTTCCGCCACCCTGGGCCAACTGGTGCACGCCAACAAG
AGCACCCGTGACTCGCGGGGCTCCCTGGACGTGTCTACCATCGATCCTGTTCGAGACGTT
CACTTTTCGGGCTCCGTTCCGTTTGTCAACGAAAAACTCCGAACCATGTTTCCCAAGTCG
AGACCAGGAGCCCAGGACAGATACAAGATGGTTCTGCACTGCGAGCCCATGTCGTCAACA
GACGCTCCCCCGATCCAAATTGAGGCCGTCAACATGACCAGGAACGAGCAAATGTTCAAG
TACCCGCCCCCGTCCATCTACGCTGTGACTCGACAGACAAACCTGCTGGTGTCGCTGCCT
TCAATCAACTCGGACATGATGTACAGCGCACGGTCGAGACAGAAGTTGCTTCCGTCGGCC
AATCTTTTGCATGCATGGGAAGTCTTCTTCTCCAAGGCCAGCAGACAAGTTCAGTACCCT
CCCGAGTTTGAAATCAACGTGAACGGAGAGAACACCGCCTACCGGTGTGTTAGCGTGGTC
TACGCCCGTCACGATGAGTACCCAGTGCTCTCGTTCGACAACACAAACGAAGCCACAGCA
GGTGTGGTCATGCATAGAAACATAGCTGGAGGAGACATGTGTGGGGTGCGAAACGAGGTG
TCTGTGGAAACCATCTGGAGAGACTACAAGGTGGCGACTGAGGACGAGTCGCAGCTGAAG
TCTGATTCGCTGTTGGACGACTTTGTGGGTAATTCCCTCAAGTTCATGGACTCTTTGGAC
GCTGAGTCGGTGCCTCTTTAACGAGGTGGGTAACGACTTACAGACCAACGAGAAACATTT
GTATATAGTATTATGATTATGATTACCAAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04884g_CDS-001

Protein length: 1167 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F04884g_CDS-001 MQIFFESEFFGLINSTYQLTPLDKMLRASKAVRVSRSGLSESLRMLPPQVRSVSTQLVRN
SGAKRKTATNTVAKQRPAKWGSRKPTPAQIEESKQQWLAAREKAKFGKLAAKLAEMKSAR
QQKQPDDGRQKVDPVTPEQRQLLDLIQGPLVTVQGDAKAHRNFLTSTLRRITPYVDEGGS
SLIEKGRFDFITGRHVVKSQLEDLCNLDDAQKSLDPASHRIPLVFDDRGNALRLSVTGFF
KLRNETRKGRYTLPLLQQINMPVRFESHRDLLLKVLEEEVQFQIEQEKIYQARLESLKSL
SEGKEKLSEEDVARYKEIQQTHVSAQSEILRVLAKMGHIVACDNFDALLKPAILQHIITD
GSETVHLLNLKDPLSRSIKINYNKFLSREGGQLDLPQAAVTDGTRVYAKYAKGVVVFPFY
KLSGVQLIEILKKVVFAEFERIRTQYGIEEDELMAQLQIMADRGDNYLKFYPEKPISAVD
EVTGLVLDETAGAAAEDDELKISFFKIHETEKEKYFSTKAAVRTDMGLPEEQESEFESVS
TAVQNSTYEDVVSELERLRPESIVVARKTWDGISQTIEKNILVDDLRQYIRDWSKENKIP
FPTTRLLKADLIHLLRDRVWKITLTDSVPNNVVSQTFKLSELQKIFLFKYHYQLVQLWVT
RGAEVSFADEKNDEIVVSAPEKILRMVSVTLSQFGSRITCAKLDMTKSQLSNMTPELWKS
LQESTETHIVHTDSDVLVYYLGNAQKKTKLLSRYIRAMSPQGHFSQSIIYQTNPESVEKS
AFFPRAVSHEQPWYQRVIKKWARWREIHGSDYLSNTQEPKLSLVSSSGVSDLPSDQSLQN
IISDTLITQLEALPSSIVTQDASQVVDSADQRQLSDRLAHKAILAGVVEPYDPAANNVAP
TVYEKVSISATLGQLVHANKSTRDSRGSLDVSTIDPVRDVHFSGSVPFVNEKLRTMFPKS
RPGAQDRYKMVLHCEPMSSTDAPPIQIEAVNMTRNEQMFKYPPPSIYAVTRQTNLLVSLP
SINSDMMYSARSRQKLLPSANLLHAWEVFFSKASRQVQYPPEFEINVNGENTAYRCVSVV
YARHDEYPVLSFDNTNEATAGVVMHRNIAGGDMCGVRNEVSVETIWRDYKVATEDESQLK
SDSLLDDFVGNSLKFMDSLDAESVPL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG