YALI0F04378g

Overview

Description similar to uniprot|P38604 Saccharomyces cerevisiae YHR072w ERG7 lanosterol synthase
Locus type CDS
Locus tag YALI0F04378g

Location

Species Yarrowia lipolytica Positions 676173..678678
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2506 (nuc.)
Previous locus YALI0F04356g Next locus YALI0F04400g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04378g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04378gYALI0F04378g_mRNA-001YALI0F04378g_CDS-001

Nucleotide sequence

 

>YALI0F04378g
ATGGGAATCCACGAAAGTGTGTCGAAACAGTTTGCGAAAAACGGACATTCCAAGTACCGC
AGCGACCGATACGGCTTACCTAAGACGGATCTGCGACGATGGACGTTCCACGCGTCCGAT
CTGGGGGCGCAATGGTGGAAGTATGACGATACCACACCGCTGGAAGAGCTGGAAAAGAGG
GCTACCGACTACGTCAAATACTCGCTGGAGCTGCCGGGATACGCGCCCGTGACTCTGGAC
TCCAAGCCCGTGAAAAATGCCTACGAAGCGGCTCTCAAAAACTGGCATCTGTTTGCGTCG
CTGCAAGACCCCGACTCCGGCGCGTGGCAGAGCGAATACGACGGACCGCAGTTCATGAGC
ATCGGCTATGTGACGGCGTGCTACTTTGGCGGCAACGAGATCCCCACGCCGGTCAAAACC
GAAATGATCAGATACATTGTCAACACAGCCCACCCAGTTGACGGAGGCTGGGGCCTTCAC
AAAGAAGACAAGAGCACCTGCTTCGGTACCAGCATCAACTACGTGGTCCTGCGACTACTG
GGCCTGTCACGGGACCATCCGGTCTGCGTCAAGGCGCGCAAAACGCTGCTCACCAAGTTT
GGCGGCGCCATCAACAACCCCCATTGGGGCAAGACCTGGCTGTCGATTCTCAATCTCTAC
AAATGGGAGGGTGTGAATCCGGCCCCTGGCGAGCTCTGGCTGTTGCCCTACTTTGTTCCT
GTTCATCCGGGCCGATGGTGGGTCCATACCCGGTGGATCTACCTTGCCATGGGCTATCTG
GAGGCTGCGGAGGCCCAATGCGAACTCACTCCGTTGCTGGAGGAGCTCCGAGACGAAATC
TACAAAAAGCCCTACTCGGAGATTGATTTCTCCAAACATTGCAACTCCATCTCCGGAGTC
GACCTCTACTATCCCCACACCGGCCTTTTGAAGTTTGGCAACGCGCTTCTCCGACGATAC
CGCAAGTTCAGACCGCAGTGGATCAAAGAAAAGGTCAAGGAGGAAATTTACAACTTGTGC
CTTCGAGAGGTTTCCAACACACGACACTTGTGTCTCGCTCCCGTCAACAATGCCATGACC
TCCATTGTCATGTATCTCCATGAGGGGCCCGATTCGGCGAATTACAAAAAGATTGCGGCC
CGATGGCCCGAATTTCTGTCTCTGAATCCGTCGGGAATGTTTATGAACGGCACCAACGGT
CTCCAGGTCTGGGATACTGCGTTTGCCGTGCAATACGCGTGTGTTTGTGGCTTTGCCGAA
CTTCCCCAGTACCAGAAGACGATCCGAGCGGCGTTTGATTTTCTCGATCGGTCCCAGATC
AACGAGCCGACGGAGGAAAATTCCTATCGAGACGACCGCGTCGGAGGATGGCCCTTTAGT
ACCAAGACCCAGGGGTATCCGGTCTCCGACTGTACTGCCGAGGCTCTCAAGGCCATCATC
ATGGTCCAGAATACGCCTGGATACGAGGATCTGAAGAAACAAGTGTCTGACAAGCGGAAA
CACACTGCCATCGATCTACTTTTGGGAATGCAGAACGTGGGCTCGTTTGAACCGGGCTCT
TTCGCCTCCTATGAGCCTATCCGGGCGTCGTCCATGCTGGAGAAGATCAATCCGGCCGAG
GTGTTTGGAAACATCATGGTGGAGTATCCGTACGTGGAATGCACTGATTCTGTTGTTCTG
GGTCTCTCCTACTTTCGAAAGTACCACGATTACCGCAACGAAGACGTGGACCGAGCCATC
TCTGCTGCCATTGGATACATTATTCGAGAGCAGCAGCCTGACGGCGGCTTCTTTGGCTCC
TGGGGCGTGTGCTACTGCTACGCTCACATGTTTGCCATGGAGGCTCTGGAGACGCAGAAT
CTCAACTATAACAACTGTTCCACGGTTCAAAAGGCGTGCGACTTTCTGGCGGGCTACCAG
GAAGCAGATGGAGGCTGGGCCGAGGACTTTAAGTCGTGCGAGACCCAGATGTACGTGCGC
GGACCCCATTCGCTGGTCGTGCCTACTGCCATGGCCCTGTTGAGTTTGATGAGTGGTCGG
TATCCCCAGGAGGACAAGATTCATGCTGCGGCCCGGTTTCTCATGAGCAAGCAGATGAGC
AACGGTGAGTGGCTCAAGGAGGAGATGGAGGGGGTGTTTAACCATACTTGTGCCATTGAG
TATCCCAACTACCGGTTTTATTTTGTCATGAAGGCTTTGGGGTTGTATTTCAAGGGATAT
TGCCAGTGAGTGTTGAGCACCTGACATTCAGCGAGTCTGACACTGAGTGATGCTTCAGCA
CGAGCTCATAGTTCACAATAGATCAGCCAGCATGAAATCAGTCAACACGAAATCAGTCAG
CACGAAGTACGTCATCAACCATCGAATTCATCGATCACCACACTCATCAACCAACCAACT
AAGCACTGTACCACCCCATTACTCCTGGAGGAACTTCCTGGCATAAGTTGTGTGTGAACT
ACAAATTTAATTATAACTAATGGAATGATATTGCACAGAGTGGTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04378g_CDS-001

Protein length: 743 aa.
Product: Lanosterol synthase, putative

>YALI0F04378g_CDS-001 MGIHESVSKQFAKNGHSKYRSDRYGLPKTDLRRWTFHASDLGAQWWKYDDTTPLEELEKR
ATDYVKYSLELPGYAPVTLDSKPVKNAYEAALKNWHLFASLQDPDSGAWQSEYDGPQFMS
IGYVTACYFGGNEIPTPVKTEMIRYIVNTAHPVDGGWGLHKEDKSTCFGTSINYVVLRLL
GLSRDHPVCVKARKTLLTKFGGAINNPHWGKTWLSILNLYKWEGVNPAPGELWLLPYFVP
VHPGRWWVHTRWIYLAMGYLEAAEAQCELTPLLEELRDEIYKKPYSEIDFSKHCNSISGV
DLYYPHTGLLKFGNALLRRYRKFRPQWIKEKVKEEIYNLCLREVSNTRHLCLAPVNNAMT
SIVMYLHEGPDSANYKKIAARWPEFLSLNPSGMFMNGTNGLQVWDTAFAVQYACVCGFAE
LPQYQKTIRAAFDFLDRSQINEPTEENSYRDDRVGGWPFSTKTQGYPVSDCTAEALKAII
MVQNTPGYEDLKKQVSDKRKHTAIDLLLGMQNVGSFEPGSFASYEPIRASSMLEKINPAE
VFGNIMVEYPYVECTDSVVLGLSYFRKYHDYRNEDVDRAISAAIGYIIREQQPDGGFFGS
WGVCYCYAHMFAMEALETQNLNYNNCSTVQKACDFLAGYQEADGGWAEDFKSCETQMYVR
GPHSLVVPTAMALLSLMSGRYPQEDKIHAAARFLMSKQMSNGEWLKEEMEGVFNHTCAIE
YPNYRFYFVMKALGLYFKGYCQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG