YALI0F04290g

Overview

Description similar to uniprot|Q987V4 Rhizobium loti D- aminopeptidase
Locus type CDS
Locus tag YALI0F04290g

Location

Species Yarrowia lipolytica Positions 657756..658972
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1217 (nuc.)
Previous locus YALI0F04268g Next locus YALI0F04312g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04290g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04290gYALI0F04290g_mRNA-001YALI0F04290g_CDS-001

Nucleotide sequence

 

>YALI0F04290g
ATGCCCCGAGCACGAGACCTGAACATTCCCTTGGACGGAACCCCCGGACCTAACAACGCC
ATCACAGACGTGCCAGGCGTCGAGGTCGGATACACGACCCTCACCTCTGGCGGCGCCAAA
ACCGGCGTGACGGCCATTCTGCCGCGCGGAAAAACCGGCGTCGGCAAGGCGTGCACCGCC
GCTACCTTCTCCTTCAACGGCAATGGCGAGCTGACGGGCCGGTCCATGATCGACGAGGCA
GGCGTTCTGGCGCTTCCAATCCTCATCACCAACTCGCACTCGGTCGGGGCTGTCCATCGA
GCCTGCGATCTGTGGGTCGCCAAACATTTCCCCAAAGTCGCTGCTCAATGGATGCTGCCG
GTGGTGGGCGAGACGTGGGACGGATACCTCAACGAAATCAACGGCGATCACGTTAAAGAA
GATCACGTGTTCGACGCACTCAACACCGCATCTTCCGGGCCTTTACAGGAGGGCAATGTC
GGCGGTGGCACAGGCATGAACTGCTACTCCTTCAAGGGTGGCTCGGGCACCTCGTCCCGG
AACGTGCAATTCGGCACCAAATCGTACACAGTGGGCTGTTTGCTGCAGGCCAATTTCGGG
CGCCGAAACGAGTTTAAGGTCGCCGGAAGACCTCTCGGCAAAGACTCGAAGGCCCCGAAT
CCGATGGGAACTACCGACTGGTTTGAACGAGAAGCCGAGGGTCTGCCCAAGGTGCCCGAA
GGGTCGGGCTCCATTATTGTAGTCATTGCCACCGACGCGCCCCTGCTTCCTGGACAGTTG
CAGGCTCTGTGCAGACGAGTACCTCTGGGACTGGCACGAACAGGTACCTCAGGAGGACAC
TTTTCTGGCGACATTTTTGTAGCGTTTTCGACTGCCGAGTCCGCGGCGTCGATTGCATCC
AAAATGCCCTATGGTCCGGCCAAGGACGAAGATATCCAGACCATCCAGTTTGTACCCTGG
GGGCATATCGACATGTTCTATGAGGCGGTGGTGCAGTGTGTCGAGGAGGCCGTGTTGAAT
GCCATGGTTGCCGCAGAGGATATGGAGGGTCGGGACGGCCACAAGAGTTTTGCCTTGCCT
CATGGCGAGGTGAGAGAGGCCTTCTGCACATAGCACGAAGGGCACAGTGACGATGAGCGA
ACGAATTGTCCAGACCAAGTAGCACAGACCAAGCCAATGGTCGAGCATAGACACCAAATA
ACATCGAGTGGAATGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04290g_CDS-001

Protein length: 371 aa.
Product: D-aminopeptidase, putative

>YALI0F04290g_CDS-001 MPRARDLNIPLDGTPGPNNAITDVPGVEVGYTTLTSGGAKTGVTAILPRGKTGVGKACTA
ATFSFNGNGELTGRSMIDEAGVLALPILITNSHSVGAVHRACDLWVAKHFPKVAAQWMLP
VVGETWDGYLNEINGDHVKEDHVFDALNTASSGPLQEGNVGGGTGMNCYSFKGGSGTSSR
NVQFGTKSYTVGCLLQANFGRRNEFKVAGRPLGKDSKAPNPMGTTDWFEREAEGLPKVPE
GSGSIIVVIATDAPLLPGQLQALCRRVPLGLARTGTSGGHFSGDIFVAFSTAESAASIAS
KMPYGPAKDEDIQTIQFVPWGHIDMFYEAVVQCVEEAVLNAMVAAEDMEGRDGHKSFALP
HGEVREAFCT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG