YALI0F04268g

Overview

Description some similarities with uniprot|P38845 Saccharomyces cerevisiae YHR146W (ohnolog of YNL173C) Hypothetical 51.1 kDa protein in DCD1- MRPL6 intergenic region
Locus type CDS
Locus tag YALI0F04268g

Location

Species Yarrowia lipolytica Positions 652245..655346
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3102 (nuc.)
Previous locus YALI0F04246r Next locus YALI0F04290g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04268g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04268gYALI0F04268g_mRNA-001YALI0F04268g_CDS-001

Nucleotide sequence

 

>YALI0F04268g
ATGATTGAATACACGTTTGTTTGGTGAGTACGAATCCGGGCGATGAGGAGACCAGGTTCG
AGGAGGAGAAGAGCGGGGAGATGTTATGAGCGATTGTTGGGGCCACGTGGAGTCCGTTTG
AGTCACGTGAAATCAGTTGGAAGTCGCGTGGTGCGATTTGAGCGAGATTCGGGCGGTGAC
ATGTTAGGGAGTGGTTTGTGACATGGCGAATGTCAGAGGTTGGCGGAGAGGAGATTTGCG
GGTGACATGGTCTCACGTGAGTGCGGATATCTTTTGTTATTTCCTGTTTCTCCCGTTTCT
TCCGTTTCTTCCGTTCCTACGTTCTCCATGTTACACAGCGCATCTCACACTGCACAGATA
ACCATAAGACGTGCGGCTGGGGAGACGCGGTTGCGGTGGGCGTCTCCCGGATGGGTGTGT
GGTCCACGTGATTAGTATCCTTGTTCACGTGACTTGGAGACTACGATGGGCTTTGGAGCA
TGTGGTGGTCTATCTGGCGATCTGGAGTCTGGAGGGCTTGAAAGTGTTCTGATTCTGACA
TTCTGGAGTCTCTGGAGTCTCTGGAGTTATTCTCGACCACTCTAGCAATCTCAGAAGATT
TTCTGGTGTATTCTGGGGCTCTGGAATCATTTGGGGTCATTTTTGAGATTTCTGTAGTCG
TCTTTTTTAAGTATTCTGGGGTGTCAGAAGACAACTTTGGAGCACTCTGAAGTTCACTCT
TGGGTCTCTAGAGTCTCAAAAGTCATTTTGGATCGTCTCAGAAACCTCCAACGATTCAGT
CACTCCGAATAATCTCTAGAATGCATCTTTTCTTGTCCGAGAAGCTCTCTTGACTGCTGT
TCCTGGCGTCACTCTGCTGTCCCTTCCATCACCCTTCTGCCTCCTAATGCCCTGCTCTGA
ATTGTGACGTCAATACTAACGCAGGCCCCACTCCGGGTCACACATCATCGTGACCGGATC
TTTCGACAACTGGACCCAGTCGCTGACCCTCTCTCCTTCTTCCGCCGGCCACTCGCACAC
TGTGGCGATTCCGGTGGAAAAAACGCTGTTCAAGTTTGTGGTTGACGGCGAATGGAAAGT
GGACGAGTCATTTGCCACCGAGACGGACGAGCACGGCAACATCAACAACGTGCTCTCGCT
CGAGATGCTGGAACAACTTGAGGGAGACGACATCCAGGAAATCACCCAGGACATCCCGGG
CGCCTTTCCCCATGAGGAGGGCGTGCGACCACGTGATGAGGGCCCGTACTCGGCAGAAGG
TGTTTCTCACGATCTGCAGCCTTCTCATTTGGACCCTGCTGCTCAATCCAAGCTTGAGAA
TGCCCTTGAGAGCAAGCAAGCGGCGGTTGAGTCCGGCGAGTTGGCTCCCATTGCCGGAAT
TAACAGGGATGTTCGAGGGCAAGATTATGGAGCTCCGGGGGCTCCTGTGGCTGTTCTCGT
TGATTCTTCCGCTCCTGGAACTGCTCCTGTTGACTCATCCGCTTCTGACCCCCTTGGTGG
TGCTGACACTTCCCCGACGGACTCTGTGGATCCCCTGTCCAAGATGGAGTCCCCCAAATC
GCCCAAATCCCCTTCCGCTAAATCACCCAACAAACATGCGATTCCCGTGGCCAGCTACGG
ATTCCCCGAAAAGACCGAAACTGCTGCTGAAACAGGACCGTCGGCAGCCCATGCATCCAT
CCCGGCAGCAGCAGCGGCACACGCATTGACGATGCACGATCTACAACCGTCGGCATTGGA
CCCGCACGCCGCAGCGACGCTGGACCAAACCATCTCGACCAAGTACTCCGCGGTCGAGTC
GGGCGCGATTTCGCCGGTCGACTCCACGGGCCAGTCACGTGCAGTGCCGTCGACCCCGAC
TCGTGGCCGACACGACTCTGAATACGACCATGTGACGGAGCTGCGCGACGAGGCGTATTC
AGACAAAGGCGACGCGCACACGCAGCAGTCTCGTGACAAGGGCAAGGCACGTGCCGAGGG
TAATCCCACTGCTCCCTCTGTGGTACCCCCCAGTCCCGGCATTGGGTCTGGATTCGACGA
GGTCAAGCCCAAGAAGAAGGATGTGGCGTTTGGAGAGGTGAGTGAGGTTGGGGGCTCTCG
GTTCCACGAGAACGAGACAGCTCCGTCTTCTCCGACGCCCATGAGTCCCCATTTGGCGTC
GTTGGCTCAACGAGAGGGCATTCCTCTGGAGGGCGACTCCGCGGGCGTTTCTGCCTCTGC
TTCTCCTTCGTTCGGCTCGCCCGCCGCCTCTACCAAAGGAGGTGTTGGTGTTGGTGGTGG
GGCTGGGGCTGGGGCTTCTATTCCTACAGCTTCTACTCTGGACCCCTCCACCGCATCTAG
TGTGCATTCTGCCGCCGCCACCAAGAGTGTGGCACCCGGTACGCCTTCCAGCACCGCTCT
GAATCTCAATGTCCCTGTTGGGGGTTCGGAGGGTGCAACTACAGATTCGTCTGTAGGTGG
AGCTGCTCCGATTGCCGCAGGTACAACTGCTGCTTCTGCTGCTCCAGCTACTCCAGTGGC
TTCTGCTCCGGTTGCTCCAACCGCCGACGTAGTGGCTGCTCCGGCGACCGCGTCGACCCA
TGCCTCGGTGGCCTCGGCGCCCGCCACCGCTGCCGATGTCACTATTACCGCGGGGTCCTC
CAAGAAGGAGAAACGACGATCCATTTTCAGAAGGTTTAAGGATAAGATGTTTTAACAAAC
GAGAGAACGAGATGAATGAGCGCAGCGAGTTCATTGGATATTTCGACGAGCGCGAGGGAA
TGAATGAATTAAGGAATGAACGAATTAAGGAATGAACGAATTAAGGAATGAACGAATTAA
GGAATGAACCCGGCGCACCCGCTGCCATTTCACTGATGCAGTTCGTGAGATGGCGTCGGT
TTGGGTAGGAGCGAGTTGTTACTTGTAACACGTTCTTAATCAGTACTAGACTTGTTAAGT
ACTGCGCTGAGTTTGAGCGAGGAAAAGGCTGGTGACTGACGGAAATGGCTAGAGTCTACT
GCGTGACCAGTTTTTAGTCATTTAGTCGTTGGGTGAGTCAGCCATCGATCCTCTAGATTA
TTTGCAATTTATGTTTGAGCAAACTCGACTGATGTTTTGTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04268g_CDS-001

Protein length: 598 aa.
Product: Conserved hypothetical protein

>YALI0F04268g_CDS-001 MIEYTFVWPHSGSHIIVTGSFDNWTQSLTLSPSSAGHSHTVAIPVEKTLFKFVVDGEWKV
DESFATETDEHGNINNVLSLEMLEQLEGDDIQEITQDIPGAFPHEEGVRPRDEGPYSAEG
VSHDLQPSHLDPAAQSKLENALESKQAAVESGELAPIAGINRDVRGQDYGAPGAPVAVLV
DSSAPGTAPVDSSASDPLGGADTSPTDSVDPLSKMESPKSPKSPSAKSPNKHAIPVASYG
FPEKTETAAETGPSAAHASIPAAAAAHALTMHDLQPSALDPHAAATLDQTISTKYSAVES
GAISPVDSTGQSRAVPSTPTRGRHDSEYDHVTELRDEAYSDKGDAHTQQSRDKGKARAEG
NPTAPSVVPPSPGIGSGFDEVKPKKKDVAFGEVSEVGGSRFHENETAPSSPTPMSPHLAS
LAQREGIPLEGDSAGVSASASPSFGSPAASTKGGVGVGGGAGAGASIPTASTLDPSTASS
VHSAAATKSVAPGTPSSTALNLNVPVGGSEGATTDSSVGGAAPIAAGTTAASAAPATPVA
SAPVAPTADVVAAPATASTHASVASAPATAADVTITAGSSKKEKRRSIFRRFKDKMF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG