| Description | similar to uniprot|Q06224 Saccharomyces cerevisiae YLR277C (ohnolog of YOR179C) YSH1 Putative endonuclease, subunit of the mRNA cleavage and polyadenylation specificity complex required for 3' processing of mRNA |
|---|---|
| Locus type | CDS |
| Locus tag | YALI0F03817g |
| Species | Yarrowia lipolytica | Positions | 559978..563544 |
|---|---|---|---|
| Strain | CLIB 122 | Strand | Antisense |
| Chromosome | YALI0F | Total length | 3567 (nuc.) |
| Previous locus | YALI0F03795g | Next locus | YALI0F03839g |
Here is a representation of the structure of the locus YALI0F03817g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :
By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.
>YALI0F03817g
GAACAACCAGTTGAAACTCGGATCATGGCTGAAAAACGCGAATCGCAGGTGAGTATTTGA
AGTCACGTGATGGTTGGACGGTTGGAGCCAACCACGTGGAGCCCAGCGCGACGAAATGCG
ACAATTCGCAGAGAGATATGACCACGGACGGAGGAAATGGCGGTACAGGCCGCCGCCGTA
GACTTGAGTGGATGACTAGCGATGAATGGATGGATGGACTGGCAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGCGGCAGGGGACCAGGTCACGTGACCAATCATGTGATCTGCAGTCTGACACT
GACTACAGCCTGTCTCATGGGGACGGAGGTATGGTGACTTAACGTGCAGTACCGTCCAGG
TGTAGACGATAGCAGGTGGAGGATGGCGCGGTGGAGTGGGCAGATCATGTGCTTCAGAGT
GGGTCACTTTCTACTCGTGGGTCACTTTCTACTCGTGGGCAACTTTCTACTTGTGAGTCA
CTTGCTACTCGCGGGCCACTTTCTACTCGTGGGCAGACCTCGTGCTCAGAAAGGTCAGCT
CATGTACTGAGACGCCGAGGCTGTTTGTGTGGCGATTTTATGGTTCTTGGTTGTTTGTAC
CATTCAGTCTGTGTCACTTGAATAGCCACGATCCCCCCTACACTCGTGAAAAGCAGTTCC
GTGCTCTCTGTTCACAATACTGCGGCGTTTTCTTCTCTGTTAGACTGACCCATCTCCCAG
CGGTTGCTCCCCCGTATGAGGGTGTGTCTAGTACTCTTCCATGCTGACCGCCCAATTCAC
CACTTCTGCGTTATTGTCATTGTCAAGTCGCCTAAAAATCCCCTACATCTTGTCGATAAT
TGTCAGCATGTCAGACTAGACGTTCTGCCTACAGCAATCCACAGGCGACCACCAAATCTG
CAGTAGCCACTGTCAAGTTATTGATCGCTCAAGATTTCTTCTGTTGGTACTGACTGAATT
GCCAGTGCTGAATCCGACTACGGCTCTTTGGGATCTCATTTGTCTACGATATATCAAATA
TTTGTCAGGGCCAGACTCACGGCTCCTCTTTTCAGTTCCCGCTAACCCAGACCGACGACT
CCGACACATTTTCATTCGTGGCGCTCGGAGGTGGCCGAGAAGTTGGCCGATCATGTCACG
TCATCTCGTTCAAAGGCAAGACTATCATGCTCGATGCCGGCGTGCATCCTGCCCATTCCG
GCCTCGCCTCCCTGCCTTTCTACGACGAGTTCGATCTCTCAACCATTGACATTCTTCTCA
TTTCACATTTCCACCTGGACCACGCTGCTTCTCTCCCTTATGTGATGCAGAAGACCAACT
TCAAGGGCCGGGTATTCATGACCCATCCCACCAAGGGTATTTACAGATGGCTCTTGTCCG
ATTTTGTGCGAGTCACCTCTGGAGCCGAATCGGACCCAGATCTCTACTCGGAGGCCGACC
TCACCGCCTCGTTCAACAAAATTGAAACCATCGACTACCACTCCACCATGGAGGTTAACG
GAGTCAAGTTCACAGCGTACCATGCCGGTCACGTGCTCGGAGCAGCCATGTACACGATAG
AAGTCGGTGGCGTCAAGGTGCTGTTCACCGGCGATTACTCTCGAGAAGAGGACCGTCACT
TGAACCAGGCCGAGGTGCCGCCCATGAAACCAGACATTCTCATTTGTGAAAGCACATACG
GCACCGGAACTCACTTGCCGCGTCTAGAACGTGAGCAGAGACTGACGGGACTGATTCACA
GCACACTAGACAAGGGCGGAAAGTGTTTGTTACCAGTATTTGCTCTTGGACGAGCCCAGG
AGATTCTTCTCATTCTCGATGAGTACTGGGAAGCCCACCCTGACCTCCAGGAGTTCTCCA
TCTACTACGCCTCTGCTCTGGCCAAAAAGTGTATCGCTGTTTACCAGACTTACATCAACA
TGATGAACGACAACATCAGAAGACGTTTCCGAGACCAGAAAACAAACCCGTTCCGGTTCA
AGTATATCAAAAACATAAAGAATTTGGACCGTTTCGACGACATGGGTCCCTGTGTGATGG
TGGCGTCTCCTGGAATGTTGCAGAGCGGTGTTTCGAGGTCTCTGTTGGAGAGATGGGCAC
CTGACCCGAAAAACACGCTCATTTTGACGGGTTACTCGGTTGAAGGAACTATGGCGAAAC
AGATTATCAACGAGCCTAATGAGATCCCCTCAGCTCAGAATCCGGACCTGAAGGTTCCGC
GACGTTTGGCGGTGGAGGAGCTCTCGTTTGCTGCCCACGTGGATTTCCAGCAAAACTCTG
AGTTCATCGATCTCGTGGATTCCAAAAACATCATTCTGGTCCACGGTGAGCTCAACAACA
TGCAGCGTCTCAAGGCTGCTCTTTTGGCCAAGTATCGAGGCCTGAAGAACAGTCCTAGAG
AGAAGACCATTTACAATCCTCGAAATTGCGAAGAAGTCGAGCTCGCGTTCAAGGGCGTGA
AGGTGGCCAAGACGGTTGGCAAAATGGCCGAGGAAAAGCCGCATGTTGGTCAAATAATTT
CTGGAGTGGTTGTGCAGAAAGACTTCAATTACGGACTCATGGGCGTTGCTGACCTGAGAG
AACACGTTGGACTGTCAACCTCTTCCGTTCTGGAGCGACAGACTGTGACGGTCAACGCAG
GAGTGGATCTGGTCAAGTACCATCTCGAACAGATGTTTGGATACGTGGAAATGAGAGAGA
CGGAGAACGTTAAGATTGAGGAGATGGAGGACGACGTGGCTGAGGAGGAGGAGGACAAGG
AGGTGAAACAGGAGGTAGAAGATGTGACCATGGAGGGTGAAGTCAAGGATGAGACCGCGG
AGGAGGTCAAGAAGGAGGAGGAGGTTGCGGAGGAGTTCAAACAAGAGGTTGAGGGTGATT
CCGACACTTCTGCGGGAACCACATTCGTCGTGATGAACTCGGTCACAGTGAAACACACTC
CCACAAGTTGCACCATTGAATGGGTGGGTTCCTGTCTCAACGACTCCATTGCCGACGCTG
TTCTGGCCATTTTGCTGACAGTGGACAACTCCAGAGCGTCGGTGAAGATGTCTTCCAAGC
AATGTGCCCATTCTCATGGCCATGAAGACGGCCACTCAAACTCCTCTCTCGACGAACGAG
TTCTGCAGCTGTCTTCGATTCTGAAAGCTCAGTTTGGAGACTCGTACATTGTTTCTGAGG
ATGGCAAGTCGGCCAACATCAAGATCGACGCCATGGAAGCCACGATTTCCTTCTCTGATT
TGTCTGTGACCGGCTCACCTCCTCCTCTTGTTCAGAGAGTCCAGGTGGCTGTCGATCGGG
CCATTTCGCTCGTCGCTCCTCTGGCTCAGAAGCTGTCGGCCGTGGACCTGGTTGAAGGTT
TCAAGGCCATTGAGAATGTCAAGGATAGGGAAGAGAATGGGGAGGTGAAGGCAGAAGATG
AAGAGAAAGTCAAGGCGGAGGAGAAAGTCAAGGAGGAGGAGTAAATAGTATCGAGTTTGA
TGTACCCAATATACAGACTGTAATATG
Locus sequence
Up/downstream sequence
Protein length: 806 aa.
Product: Endoribonuclease, putative
Browse the locus neighborhood with JBrowse:
ATG