YALI0F03542g

Overview

Description some similarities with uniprot|Q08217 Saccharomyces cerevisiae YOL045W (ohnolog of YAL017W) similarity to ser/thr protein kinase
Locus type CDS
Locus tag YALI0F03542g

Location

Species Yarrowia lipolytica Positions 500411..504904
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 4494 (nuc.)
Previous locus YALI0F03520g Next locus YALI0F03567g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F03542g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F03542gYALI0F03542g_mRNA-001YALI0F03542g_CDS-001

Nucleotide sequence

 

>YALI0F03542g
ATGGCCCCCACCGACCACAATGAAGCCGGCGCTACAATGCCACAGGTGTGTGGAGACGAG
TGTCTGGATGAGATTGTAAGGGTCAAGTGTGAGGAGAAGCCTTGTAGGTGAGTTATAAGG
AGTCTTGGGTGGTCCGAGAGCTGCCCCAGGTGTCTGAGCCAAAGGTGAGGGCATGACGGT
GATGGTGTGGTTACAACGCGGGTGGTGTCATGGACATGACAGTGGTGGTATGGTTACATC
GCCGCTGGTGTCGTGGGCATGACGTGGGTGGTGTCGTGATGACGTGGGTAATGTCGTGGG
TAATGTCGTGGGCATGTCGTGGGCAAGGTGTGGCCTCGTGACAACATGGGCACGTTTGGC
TAACGGTCGCCAACCGTCGCTGCCAGTCGCCAACAGCCTGATGGCGTATGACGATGAGTC
GCCGAAGCTGGCTTGTGTTGACAATCTGCTCTGTTCTGGCGTTTGTTGATACTTCTACAT
CAACTCTGTGCTGTGGTTGTTCCGTTGAGCTGGTCGGGTCGGGTCAGCCGGCCCGAAAGC
CCCCTCCCCCTACAGCGACACCGTCGGTCAGCGACATGTTCTGTACTGGGTTCACGGCGT
ATCGTCGAGCCCTGCGACGTCGCACAGCCACGACTCAGCCTTCGAGACAGAAGAGACAGT
GGAGACACCCTTAAGGGCACGTTCAGAAAGTTCAGATTGTTCCGACATTCAACTTACTCT
AGTTCGGAAAAATGTCGTTCAATATTGCCCGCTTCGGTGTACTGTCTCAGACTTGTGGGA
GCCGTCCACGGCTTTGTGGTCGTGCACTGTCTATCCGTTTCTGCTGCAGTCACTACACTG
CCCTGTCGTCATTACACTGCCCTGTCGTTGACACCACTACTGCCCTGTCGCTACCTACTG
CTGATATCACCAACCTCGCTCTCGCATCTAGCTTCTTTTCTCTTTACCAACTAACACAGA
ATCGAGCTCCCCTCCAACATGCTCTCCTCCAACTCCTCCTCTGCGGCAGAATCCCTGCAA
TCCTTCTCCTACGCTTACGTGTCCCATTCCGGGCTCTCTTCCCGCATGGCTCTCATCAAG
CGAGCCATCCAGTTCCTCCGAGAACACTCGACGGAGATTTCAGAAACGTCGTCAGCCCTG
ACCGACTTTTTTGTCTCCCATCAGCATGAAGTTGAGCCCTACACACACGCCATGGGCATT
CCGTTTTCGTCCATCCAGCGCAATCTGTCGACCGCCAGCATGACGGACTTTTTCAGCACC
TTGCCCAAACGGCAGACTGGTGGCGACGACCAGGGTCTGAGAGGACTGCTTTCGTTGCTG
GAAAACCGACATGGAGATACGCGCAGATCGCTGAGCCAGGGCGTACGCCCTCTAGATACG
TCACGTGAATTGTCACGTGAATTGGACGACGCGCCGGCCGACGGCATGCAGTCGCGTGCG
CTCAAACCAGTGGCGTCTGCGGTGGAAGTTTCGGCGGAGTCGCAAGATTCTGAGTCGCAA
GGTGATGGGTCGCGTGAGCCCGGGGAACCTTCTGGCGAATCGCGCGACGCCGACTCGACT
CTGCTCGGATCTCCGATCAAAGCCAGTGCACTCAAGCCACGAACAACGTCGTGGTCCGAG
TCCGAGGACGACGAAGAGGGTTTGTCGTTCACGCCCAAGCGCATGAGTCAGCAGAATCTC
GCGCCCAAGCTCCTGGAGCAGCTGACCCATCACACTCCTCGGTCGGTTTCTTCGCCGCTC
TCCAAAGAGGTCCTGAGTGGCTCCTCGGGCTCGTCTCCGGCGTCGTCGTCTCCCTCCATT
AAGCGGACCCGGACGCTGACCAACACTTCGTCGCTTTCTCTGCAGGCTAAGCTGCTGGAC
TTTTTGGCCGAACCTTTCCAAGACAAGGCTCTTCAGCCCATCACCAGAAGTGCCACCATG
TTGGACGTGTCGAGTGCCCCGGAACAGATGGGCGGCGGCTCGGCGGGTCACATGGGCAGT
GGCAGTGGCGGCGTGAGTTCTGCGGGCTCCTGGCTACCCAGCAACGTGGAGTTGCAGCCT
CCGGTGACCACGCCCAACTTGGCCTCTTCCAAGTCAACCACTGGTCTCGGCTTGTTGACC
GGGACCATGGCGCGGTATTCGGCGTCGCAGGTTGTGGTGACGACAGCCGACAAGGCTCCG
TATGAGATCCGGGCCGTCAACGACGTGGCTTGTCTGGTGTTTGGCGTGTCACGTGCTGAG
CTGCGGAACACGTCGATTCTGAACATGGCTCGTGACGACATGCGGGACGAGTTGACCGCG
GAGTTGGCTGCGGCACTGACCAAGCCCAGCTCGGTGGCCATTTGTGGCATGGTCATTCCT
GTGGTCAAGGGCAACCGTCAAGAGTCGTTGGCGTCAATCTGGGTGAAAAAGTCGCAGGGC
GCGCTCATCTGGGTGGCCGAGGAGGTTGCTGGCGATCATGTGGAGGTGGTCATGAAGAAG
CGTGACCCTGAGGTGGTGGAGACCATTGGTGGAGATCGTAACATTCTGTTTGGCCAGCAT
GATTGGGCCTCCTACGGCGATATCAAGCGAAAGATGTTGATTCGGAGTGTTGGTGATGGA
AATGAGGACGGTGGTAGTTTCAACGGTTCTGTTGGTTCTGTCGGTTCTGTCGGTCCTGTC
GGTTCTGGTGATTCCAGCGAATCTGCCGCCGCCCACCCCTTCCTTTCCAACATCACCTAC
TCATACACCACCAAAGCCGGACCGTACGACTACCCGTGCATTGTGCGCAAGGAAAAGAAC
ACATTTCACATCACCTCTCTGCCGCACATGTCGGGCATGGTGATGGTGGACTCGTCGACT
CTTGACATCACCGATTACAACGCCTTTTTTGTGCAGTATCTGTTTGGTCATAGCAGCAAG
TCGCGGTCTCTGATTGGACAACACATTTCCGTCCTGTTGCCGCATATGAGCGAGTACATT
GACGAGATCAAGCGCAGCAACAACTCGTTGGGCCTGGGCATGGTTTATCCGGAGCATTTT
TTCCGACGAATGGCATCTTCTGGCGACGATAAACGCATGACATTTTTTTCATCGATTGGA
ATTGATGGTCGGCATTTGAACGGTGCCACGCTCAAAATTGATTGTCAGCTCCGCGTCGCG
TCCACGAGCCAGTTTTCTCTGTGGATTTCGTTTTCGCGCCACATTCAAGAGGCCCATGAG
ATTTTTTCCATTCCGTCTCAGTTGCCGCTATTGAACGAGCGCAAGCGAACCGAGGGGGAG
GATTCGGGAAGCGACTCCAGCGGCGGAAGCTCCAGCATGGCCCATTCTCGAGAAAGCTCG
TTGGGCGACACTGACACGTCTGTCAGCGAGCTTCGGGAAAAGTCGGTGTATGGTCTGAAG
AACGAGTCGCAAAAGTCCTTGGCTTCAACGCGGTCTCTAGAGGCTGACGGCTCTGTTTCC
GAGGCCGATGGCTCGTCGTCGACTCTGGCTGCGGCGGAAATCTCCGAGCTTCGAGGAGTC
ACCGAGATTGGAGCCCACAAGCGGGATCGCAAGTTTGCGGACTTTCGGGTTGTGAAAAAA
ATGGGTGAAGGCGCTTATGGGCGGGTGGTGCTGGCGCGGTACCCCGATGATCCCGCCTGT
CTGATTGTGGTCAAGTCTGTGGTCAAGGACCGCATTTTGGTGGACACGTGGGTGCGGGAT
CGAAAGCTTGGCACCGTGTCATCTGAAATCAAGATTCTGGCTGCTCTCAACCAGACTCCG
CATCCCAACATTGTGGGCATGGTCGACTTTCTGGAGGATGATGAGTGTTACCATATAGAG
ATGGAGGCGCATGGCAATCCCGGCATCGATTTGTTTGACTTGATTGAACTGAACCCGCAG
ATGCCCGAGGCTGAGTGCAAATCTATTTTCCGCCAGATTGTGTCTGCCGTGGCGCATCTA
CACGGGCTTGGAATCGTGCACCGGGACATTAAGGACGAGAATATCATTCTCGACGGCAAG
GGGCTTCTCAAGTTGATCGACTTTGGCTCGGCGGCATATGTCAAGAACGGCCCCTTTGAC
GTGTTTGTGGGCACTATTGATTACGCCGCCCCCGAGGTGCTCAGTGGCAACCCCTATCTG
GGGCGGCCTCAGGATGTGTGGGCTCTGGGCATTTTGTTGTACACCATTGTGTACAAGGAG
AATCCCTTTTATAACGTGGATGAGATTCTGGAGGGCGAGTTGCGGGTGCCGTTTGTCATG
TCCGATGATTGTTTGGACTTGATACGGATGATTCTCAACAGAGACGTGAACAAGCGGCCC
ACCGTTGAACAGATTCGCGATCATCCGTGGTTGCGGGAGTGATGGGAGGAGAACTGAACG
GAGATATCCGCATCTCGAAGGTGGCATGTCGACGGCCACAACCGTGTGACCAGAGATGGT
TCATGTTGACGGAAATCAACCACGTGACTCGGAACTGTCTGTTTCTGTCCGTCTTTCTGT
TGCCTCTACTAGATGTAGAATAGACACTAGCGAAAATGCATTATTTATATGATC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F03542g_CDS-001

Protein length: 1150 aa.
Product: Conserved hypothetical protein

>YALI0F03542g_CDS-001 MAPTDHNEAGATMPQVCGDECLDEIVRVKCEEKPCRIELPSNMLSSNSSSAAESLQSFSY
AYVSHSGLSSRMALIKRAIQFLREHSTEISETSSALTDFFVSHQHEVEPYTHAMGIPFSS
IQRNLSTASMTDFFSTLPKRQTGGDDQGLRGLLSLLENRHGDTRRSLSQGVRPLDTSREL
SRELDDAPADGMQSRALKPVASAVEVSAESQDSESQGDGSREPGEPSGESRDADSTLLGS
PIKASALKPRTTSWSESEDDEEGLSFTPKRMSQQNLAPKLLEQLTHHTPRSVSSPLSKEV
LSGSSGSSPASSSPSIKRTRTLTNTSSLSLQAKLLDFLAEPFQDKALQPITRSATMLDVS
SAPEQMGGGSAGHMGSGSGGVSSAGSWLPSNVELQPPVTTPNLASSKSTTGLGLLTGTMA
RYSASQVVVTTADKAPYEIRAVNDVACLVFGVSRAELRNTSILNMARDDMRDELTAELAA
ALTKPSSVAICGMVIPVVKGNRQESLASIWVKKSQGALIWVAEEVAGDHVEVVMKKRDPE
VVETIGGDRNILFGQHDWASYGDIKRKMLIRSVGDGNEDGGSFNGSVGSVGSVGPVGSGD
SSESAAAHPFLSNITYSYTTKAGPYDYPCIVRKEKNTFHITSLPHMSGMVMVDSSTLDIT
DYNAFFVQYLFGHSSKSRSLIGQHISVLLPHMSEYIDEIKRSNNSLGLGMVYPEHFFRRM
ASSGDDKRMTFFSSIGIDGRHLNGATLKIDCQLRVASTSQFSLWISFSRHIQEAHEIFSI
PSQLPLLNERKRTEGEDSGSDSSGGSSSMAHSRESSLGDTDTSVSELREKSVYGLKNESQ
KSLASTRSLEADGSVSEADGSSSTLAAAEISELRGVTEIGAHKRDRKFADFRVVKKMGEG
AYGRVVLARYPDDPACLIVVKSVVKDRILVDTWVRDRKLGTVSSEIKILAALNQTPHPNI
VGMVDFLEDDECYHIEMEAHGNPGIDLFDLIELNPQMPEAECKSIFRQIVSAVAHLHGLG
IVHRDIKDENIILDGKGLLKLIDFGSAAYVKNGPFDVFVGTIDYAAPEVLSGNPYLGRPQ
DVWALGILLYTIVYKENPFYNVDEILEGELRVPFVMSDDCLDLIRMILNRDVNKRPTVEQ
IRDHPWLRE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG