YALI0F03567g

Overview

Description similar to uniprot|P00424 Saccharomyces cerevisiae YNL052W (ohnolog of YIL111W) COX5A mitochondrial cytochrome-c oxidase chain V.A precursor
Locus type CDS
Locus tag YALI0F03567g

Location

Species Yarrowia lipolytica Positions 507757..509717
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1961 (nuc.)
Previous locus YALI0F03542g Next locus YALI0F03575g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F03567g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F03567gYALI0F03567g_mRNA-001YALI0F03567g_CDS-001

Nucleotide sequence

 

>YALI0F03567g
TGCATGGTCGGGACCATTCTGCTGCAAGGCGATTGGCTGGATTTGCGTCAGTGGAATTCT
GACACCACCTTTTTGAGGAACCTTGTTTCGGGGTTAGGGCATAGAGCCCCAGTAGCGTAA
CCAACCCTAGTCCACTTACTGCATCGGCCGACGTCTCTCGCTCTTTTCAAAAACAGCTCT
CCCAGCTTTTACACTTTCCCACACGTCTTATACACAGAACAAGTTGTGCCAACAGTTTGG
TGAGTATGAGCAAATATCGACGGCGATGAGCAAATTGAGAGCTGAGACGACATGGCGAAC
GTCGTGGCTGGACAGCGTGTTTCTCCCCCCGTGTGTTTTGACGTCAATCGAACCTGGCTT
TGGTTGCGGTAATGGCCGAGGGTGATTGGCTGGAGGATGCGGGAGGATGGTGATGATGGG
TAGGGCGCTCGGTGTGATTGGCGACGGTATGAACAATAGGGTGATGACCAAACCAGTGGG
ATGGACATAACAGGGACAGGGTCGTGGGCCACAACATGGATGATGTCACCGCATCACGCT
AGTTACACTAGTGGGATGATAGCCACGACCGAGGTTGTGTGATGAGACACAAGGCTCATG
TCGTGGCCGGTCTCTCACCGAAAATCACAACCAATTTGTCTCCCAGTCCGATCGATGATG
CCGTGTTCTTTTGTCGCAGATTCCGTGTCGTTTTCGGTGTTTTCTGGGTGCTCTGCTGTG
GTGGGCAGAATCGTGTGGTGGGTACGAGGAAGAGAACTCTCCACCTTTTTGATTCTTCTT
GACCATTCTTCTTGACCACCACTAGTTGCAATCGAAGACACCGACAAAGGACACTGAATG
GCGCCGATGACTCCCTAGCACAATGGCCTGATTTCCACCCAGAATCCCGTTTGTGCACAG
ACCCAAGAGTCACACATGAGCACAGAGTGACACAAACACGTCCGCCAGCGATGACCACGA
GCGACGATAGAGACACAGCAGATTCACACTCAGACCCGGGCTCGGACTCAGATGCGATCC
ATTCATCCATTGATTCGGTCCCCCTATTGACAGCTTCCGATTGGCTGGGAACATCTGACG
TTGAAGTACAACCATATGTCGGGCGTGCGGGTGTCATATGCCGGGTGTGCGGATGTGGCG
GCGGTGTTATGTTACGTGGTCTCAAGTTGGGTTGATCTCTTTCTCAGGTCGCCATATGTT
CAATGATGCGTGCCATCTGGCAGGGCAGCAGGCGCTTCCGGACGCCTCACCTGTCCAACG
CTCCTCGTGACACGCACTCGGTGCGCTTCTGTTCGATCTTTACTAACCTAGCAATGCTCG
CCTTCAAGTCTCTCCGACCCTCTGCTGTCTCCCGACTGGCAACCTCCACCCGAGCTGCCC
ACGTCATCTCCACCCCCACCCTCATCAACATTGAGAAGCGATGGGAGTTCATGCCCGCCG
AGGAGCGTGAGGACATTGTCCACCAGCTGACCGAGCGACAAAAGGTCAACTGGAGCGACC
TGACTCTCGCCGAGAAGCAGGCCGCATGGTACATTTCCTACGGCCCCTGGGGCCCCCGAA
AGCCCGTCCACAACCCCGGTGACCAGACCAAGATCTTTGTCGGCATCGGCATCGGTCTCG
CCGCCTCCGTCGCCATCTTTGGCCTCTGCCTCGCCTTGCAGCCCGCCGACAACGTTGCTC
TGCGAACCCAGTCCTTCGAGTGGCAGGAGAAGTCCAACGAGATCCTCAAGGAGGTTGGCG
CCAACCCCTTCACCACCTACAACCAGATCCAGTCTCCCTCCAAGGGCCCTCTTCCTGATG
AGGATGAGGATGACGACGAGTAAGGGGATTAGACGACTAGCTGACTCTCAAAGTAATTTG
AAAATTGAATGCATTGCAAAGCAATCTGCGGATTGCTGTTTGTAGTGGGCATCTTTGAGC
ATAGCTCGATATGCCCTGTGTAGATCAACTGTCGAGACTGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F03567g_CDS-001

Protein length: 170 aa.
Product: Subunit Va of cytochrome c oxidase, putative

>YALI0F03567g_CDS-001 MLAFKSLRPSAVSRLATSTRAAHVISTPTLINIEKRWEFMPAEEREDIVHQLTERQKVNW
SDLTLAEKQAAWYISYGPWGPRKPVHNPGDQTKIFVGIGIGLAASVAIFGLCLALQPADN
VALRTQSFEWQEKSNEILKEVGANPFTTYNQIQSPSKGPLPDEDEDDDE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG