YALI0F03432g

Overview

Description weakly similar to uniprot|Q06628 Saccharomyces cerevisiae YPR185w APG13 protein required for the autophagic process
Locus type CDS
Locus tag YALI0F03432g

Location

Species Yarrowia lipolytica Positions 482588..484853
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2266 (nuc.)
Previous locus YALI0F03410g Next locus YALI0F03454g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F03432g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F03432gYALI0F03432g_mRNA-001YALI0F03432g_CDS-001

Nucleotide sequence

 

>YALI0F03432g
ATGTCGTTCCAAGGCACGTCGTCCGGGTCGTCGCACTCATCCAAGTCGAAACTCAACCAG
GTGGTGCAAAACTTTTTCTCCAAGGCCACCCAGGTGGTGGTGCAGGCGCGTCTCAACCCC
CGGCTGCGTGAACAGCGCCAGAGCGGCGACAAACACAAACTCAACAAATGGTTCAATCTC
GAAACAGACGAGCTGGAGGCCTACCGTGAAGATCTCAAGCTGTGGCGAACCATCGACATC
TACAACATGGACAAGATGCCTCCCGTGGTCGTGGAGACCTATCTGGACATGCGCCATCTT
TCGCCCAACCAGACGCTGGTGCTAGAAGACGCCTTTGGCAAACGGTGGAACGCCAGCTTT
GGAGGAAGGAAAACAGAGGTGGTGCTGGAGCGGTGGGTCATTGAGATTCAGAGACCCGAC
CCCCAAGCAGGAGGAGCTACAACGTCCCCAGCGTCGTCCACAGAGCTCCCCATGGCCTAC
AAAAAGTGCATCTTGCTGTTCCGCTCTCTGTACACTTATTGTAGGCTGCTGCCAGCGTGG
ACGCTGCAAAAGCGGCTTAGCAAAAGCAAACTGAGCACCAGTCCGCTGCGCATCGGCTGC
AGGGTGCTTAACGGCTCACAGCCCATCTCTTCGCGTGGGCGGGTTGGCTTGAGCAAACTC
ATAGCTGGGAGCTCCGAATCCCAGCATCTCCAGACCTTTTCGTTCGACCCCGTGGAAATC
CCCTCGGGCGTCTTCAAGATCAGCGTGAGCTACCGGGTCAACTGCAACTTTGCCGTGGAC
GACTCGGAGGCCATGCTGTCATCACAGTTCCTGCGCATCGACGAGGAGAAGCCCGTGGTG
CCCCCCAGCCCGCCGGTCAAACACCCCTCCATGGCGGCCCCCAACTTGCATTACATCACG
GGCCTGCCACGGAGACATTCGCATTCTCAGGGCGTGGGAGTGAGTGGGGCGGCCATTGTT
CCCACCTCTGTGTCATCTGTCACAGACTACATGGAGAGGAGAAGGAGCAGTGGCGCTAGT
GGAGTTGGAGCAACTGGAGGGGGTCTTGCTGGCACCTCTGGAGGCTCTGGCGGAGTGAGT
GGAGGAGTTAGCGGCGGATCTGGAGGCTCAGGGGGCTCTGGTGGCTGGGGAGGTGAAGAG
GGCTCGCCTGGTCCCGCAGCGACCTCGGCTAGCCCCTCCACACCTCCCTTTGCGCGTGTC
CCCTCATCCTCCTCCCTTGCGGCGCTCCGAATCCCCCGCAGAACTATCTCAAACTCGTCC
ACGTCCTCCACCAATAACGCACGGGTGGTCACCACGCCTGGGTACACGCCTTCGGCGTAC
GAACAGGCGATTTCGTCGTCCGGAGGGTCGTCACGTTCCGGGTCCGTGCCCAAGTACTCG
TCATCGTTCGGTACAAGACAGTGGAACCGTTCAGGCTCGATCAGCAGCACGCGGCGTCGA
AACTCAATGCTGGTGGGCTCGGCTGAGTCGGCCATGTCTTCGGGCTCCTCTCTTATGGAA
CCTGGATCGGGTTTTATCGACATTGAGGATCCCACCGACGTGTCCGACTTTGTCAAGATG
GTGGACTCGATCAAACCCGGGTCCCCGTACTCGCTGCCGTCTCCCCGCAAGGGCAGCGAT
CCTTTGGCGCGGTTCCAGCAGCTCAAGGGATCGCACGCGGGTATTGCCGACAGCATCACG
TCATCAATCTACCACCACCAGCCCAGTCCTCCGTACGTGCGGTCCAAACTGAGCGGCGAG
GCGAACCTGGAGGCGATTTCAAGCCTTCCCCGGCCCGTGACGGTGCCTCCATCGCCTCGC
AAGCTAGAGACGCAGATGCAGCCCATTTCGCTGGCGGACCAGCATACCAGCGAGTACCAT
CAGCTGCAGCAGCGGACCAGTGCCCGTCCCCAGGCTCATTCGTACTCTGAGCGTGACCAG
CTTGATAACTCTCATTACAAGGCGTTGGAGCGATATGATCTTGTAGGAGCTTCTCCAAGC
GTGGTGGGCTCTAGATATTATACCGAGCACGACCGGGGACGAGGCGAGAAGCGATACTCG
GTGGCTCCATTGCCGGGTCTAGAGTTTGACGAGGACGATGATTTGTTGTTTGCCATGAGT
GATATGGCTATGGGGGATTCGGCTTCTGGAGGAAATGTGAGGACATAGTCTTGTGTTTCC
GAGCACACCTCCTAAAAGATGATGGCATACACTACCAGAGTACCAACACCAGCAGAGGAC
ATAACTTATATCAATGACACATACTTATTATATTTATACGATTTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F03432g_CDS-001

Protein length: 716 aa.
Product: Conserved hypothetical protein

>YALI0F03432g_CDS-001 MSFQGTSSGSSHSSKSKLNQVVQNFFSKATQVVVQARLNPRLREQRQSGDKHKLNKWFNL
ETDELEAYREDLKLWRTIDIYNMDKMPPVVVETYLDMRHLSPNQTLVLEDAFGKRWNASF
GGRKTEVVLERWVIEIQRPDPQAGGATTSPASSTELPMAYKKCILLFRSLYTYCRLLPAW
TLQKRLSKSKLSTSPLRIGCRVLNGSQPISSRGRVGLSKLIAGSSESQHLQTFSFDPVEI
PSGVFKISVSYRVNCNFAVDDSEAMLSSQFLRIDEEKPVVPPSPPVKHPSMAAPNLHYIT
GLPRRHSHSQGVGVSGAAIVPTSVSSVTDYMERRRSSGASGVGATGGGLAGTSGGSGGVS
GGVSGGSGGSGGSGGWGGEEGSPGPAATSASPSTPPFARVPSSSSLAALRIPRRTISNSS
TSSTNNARVVTTPGYTPSAYEQAISSSGGSSRSGSVPKYSSSFGTRQWNRSGSISSTRRR
NSMLVGSAESAMSSGSSLMEPGSGFIDIEDPTDVSDFVKMVDSIKPGSPYSLPSPRKGSD
PLARFQQLKGSHAGIADSITSSIYHHQPSPPYVRSKLSGEANLEAISSLPRPVTVPPSPR
KLETQMQPISLADQHTSEYHQLQQRTSARPQAHSYSERDQLDNSHYKALERYDLVGASPS
VVGSRYYTEHDRGRGEKRYSVAPLPGLEFDEDDDLLFAMSDMAMGDSASGGNVRT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG