YALI0F03410g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F03410g

Location

Species Yarrowia lipolytica Positions 478143..481898
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3756 (nuc.)
Previous locus YALI0F03388g Next locus YALI0F03432g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F03410g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F03410gYALI0F03410g_mRNA-001YALI0F03410g_CDS-001

Nucleotide sequence

 

>YALI0F03410g
ATGAGCATAGCCAACACGGTGAGCGTGGACTCGGTATCGCATGCTCTGGCGTGCGAGCTG
TCTGCTGACGGGTCGGTTTTGGCGGTGGCTTTTGTGGACAAGTCGGTGCGTCTTTTCATC
CGACAGGACGACTTGTGGACCCGGCAGATGACGCTCTTTCACAATGACGGAGCCGTGGAA
CACATGAGATGGCTAGAGTGGGTTGCGAAGGACGCAAGTCCGACCTTGGCGATTTCGTCA
GGCCAGGAGGTGGCCATCTTTGAGCCCTACAACCGGGTTTCTCCCGTGACCAAAATCTCG
GCCCCGTTTGTGGTGTGCGGATTCAGCCAATCAGGGGACTATCTCATGGTCTGGGGATGT
TCCAACACGATTCTTTTTCAAAAGTGGAAAAACTACGACACGGAAGCAGAGGTAGCCCAA
ATCCTGGTACCATTGCCCTCGTCGGTGGGATGGCCCCTGGCAGCCCCTTTCCAGCAGTAT
CGTGACTTTCTGACGGTCGGAAAACGCAATGCAAGCATCTCCGCATGGTCTATAGTGGAC
CATATGCACGAGTCACGGGTTTGCATGCCTGTGTCTTTGTACGAGTCACGGTTGACAGAC
TCGGCCTATGGGCCTGGCCTGTTGGTGGAAAAAATCGGGTCTTCGCACTGGGTGGTTGTG
CAAAAGAATGGATGGACGCTCGTCAAGTGGGAAACAGAAGATGACGAGCCTGGCATCCAC
CAGGAGATTTCTGCCGACTTGGAGGGCGTCAAACAGGTGATTGTGACGGACCCCAGTGCC
AAGTCGCCGTCTTTCGGGTTTGTGACCAAGAAACACACCGTTTTCTGGGTCTCCAACGGC
CATTCCCAGCTTGTGGATGCTCCTGAAGGTGCATCTACGCTCGACTGCTGTTTCTATGAC
TGCCAAACAAGCAGGATTGTTGGTTTGTTTACAGAAAATGGGGAGACACTGACAGACAGT
ATCAATGTGTCTCAGTGGCCGCTGACTTGGTCTGGAGAGAAGCGTGCTATTCAGGTGACG
AAACAAAAGGAGGAAGAGATTGAACACCCCTTGGCAGATGTTCTAAACATCAATCTCAAT
CAAAACGGTGATGTCTGCGCCACTAGTACCCACATTGACTCGGCCACGTCCCTTATCGGC
CTCTCAAACGGCTCGATTGTTCATTCTGAGTCGGGCAAGACAATCAGAGGTTTCACAGGA
CCGATAATCCACTTGTTCGAGTTGGCTAAAGAGTTCCGAGTGGCCAGTCTTGTAGCTGCA
GGTTCTGCCGCGGCTGCAGCTGTGTCAGTGGGCGTCCCGTATGCAGCTGCGCCTCCCAGA
AGCTATATTGCTGTTTCTGGGTCGTCTGAAGTAGGAATCATCGACTCCCAGGGCCAGCTC
AAGTACATGGTTCCAGGCAACCATGCAGCTATCACCAAGCTGGTCACCTACGTGAACCTT
CCCAACGTGCTTGGAGTCAAGTATCTGGATGGCAGTAAGCGTCTGTGGAGCCTGGAGACC
AACGCAGAGTTCTCTGACAAGCTGAGCGCTGAGAACTGGGAAATCGAGCTGCATTGCTTG
TGTTCTTCTGGGGAGGATGGCCAGATGTTCGTCGACTCACGAGACAGCGGCCTTGAGAGT
GCTGGCTCTTGGGCTGTTAACTTGGAGCCTCTTCTGAAGAGTGGGAATTACGTACAGGTT
TGTCGGTCTATTTTGGCTTCAATTAGTCCACAGATTGAAGATGGAGACGATGACCCCTTC
TATTTGTTGCTGGCGGGCTTGCCTCCCTCAAGTACAGTTTCTGGCTCATTGTCAACCTGT
GGAGCATGGGTTTATGATAATGGACTGCTTTCCGTGTCACATGACTTGACAGCAGTGTTC
CTACCAATCGTTGCAGCCCTGGCTGACACAGTTTACGAAGCCCAGGAGGGTAAGAGGCTT
CAGCTGACTACTCTGAAGCCATTGACCTCTGTTAAAGGGTTCCTGACTCCCTCAGCTACA
GCTCTAGCTCATACAGCAGTGCACAGCTCGTCGCGACTGAAGAGAGCAGCCAAGCAGTGT
CTACAGGCCTTCTTTTCGGACTTGCGATACGACCAGGAATCGCTGCTTATCTCCATCTAC
AGTGACAATAGCAACCTGCTGTTTGACCCTGCAGACCCCACTTCTTCCTGTATCTCGCTA
TACATCATTACAGCTATTGCACGGGTGACTGGATTGCCAGAGTACACAGGTCACGTGTGT
CAGGTGGTGCGCAATGGCATGGAAACGGACTCTGTTCTTATCCAGCAGTCTTCTCTGGAC
TGTTTGCATCAGCTGTGGCCCTCGTTAAAGCCTGGACTGGATCACATTGTCGATATTGAA
GCTGTGATTAGCTGTTTGGCTCGTCATGCCCATTTGTCGTCTGATTGCTGGTCTGTCATC
AACAGAGTGACTCGTTCCAACGCTCCTTTGTTGATCACTGCTCTGGTGTTTCTGCTGGAG
AACCTCGACAAGCCGTTAGTTGTGCGAATCACAGCTATCGATGTGCTTTCCAGCTTCTTC
AGCCACACCCGAAAATCCTCCTCCATGGACATGTTTGTGCCGTTTGTGATGCACACTGCT
TGCAAAATGCTGAATCCGGACTTGCTGCGTCACTCGACCCTCCAGAGAGGCGTTTCTCTG
CAGTCCAAGGTCACAGCTCTACTGTCTCAAATCACACAGACATTTCCGTACATTGTCACG
TTCCATAAGCCCAGTCAACGTCTGGCTGTGGCTATTTATCCTACTGCCACTGCTGTGATG
ATTGAAAAGAATGTGTCTCGACGAAGATCTTCTCTGTCTGAACTCAACAGAGACCTGGAT
ATTAAGGTCACCGACACCTGTTCTCTGATTGTCTACGACTTGAGAATCGGCTCAGAGTAT
GCCTATCTTGACCCCCAGGAATTCAATTCCAATCATGCTGCTCCGGTGTGGGGCCTGGTC
TTTTCTCCGGATGGAAAAATGGTTGCTGGACTCACGGGAATAGGGTCTAATAGCGTCCCT
GGGCCCGATTTCGACGGAGAAACACGTGTCGTCGTTTGGCAGATGGAAACCCATGGAGGC
ACCTTCTCTTCGCTGTTCGGTAACTCCGCAAACTCTTCCCATTCCTCCCAGGGGGTCTAC
TCTGAATCAGTCAAGTTTGGCAAGTCAAGAAACGTCGTGGAGAGACAGGTGGAGATTCTG
CTCTATGCCAGCGTGGGCAAAATTGGATACAGGGATAAACAGACGCCGAGCTTTGAGCCG
GCAAAGGTGGAGAGCCTGGGGAAAGTCAAGAGCGACGGTTTGAGGGTCACGTGGGTCTCG
GAAACGGTCCTGGTGGTACAGGGAGAGGGGGTGAAAAAGAAGGTGGTCATCTGAACAACC
TGAGCAGATCCCAGAATGTCGACCTATCAGCAGATTGAACGAAGCCATGTGTGTGCTCTG
CCTCATGCACAAGTGTCTGTCTGACTCATTGGCACATGGACAAAGCCTGTGAGACAAGCG
GAAGTACTCCTGCACTGTATGACTGAATGTGAATCACTACAGGTACTGTATGTACTGTAC
AGTACTCGTACAGTTAAGTAGCACATATGCATATCGATGAGTGCGACTGCGACTGCTTGT
TTGGGATGCTCTCTACTGGCAGTACAAATTGGACCGGTACTTGCTTTGGCGTCATGGGAT
CCTTTGCGTTATGAGATTCCACCCCATTGTCTGTATCGAGAAAACCCATTAATAAAGGAA
TATATAATCTTCATCCAGAGTCTGAAGCAAATGTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F03410g_CDS-001

Protein length: 1118 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F03410g_CDS-001 MSIANTVSVDSVSHALACELSADGSVLAVAFVDKSVRLFIRQDDLWTRQMTLFHNDGAVE
HMRWLEWVAKDASPTLAISSGQEVAIFEPYNRVSPVTKISAPFVVCGFSQSGDYLMVWGC
SNTILFQKWKNYDTEAEVAQILVPLPSSVGWPLAAPFQQYRDFLTVGKRNASISAWSIVD
HMHESRVCMPVSLYESRLTDSAYGPGLLVEKIGSSHWVVVQKNGWTLVKWETEDDEPGIH
QEISADLEGVKQVIVTDPSAKSPSFGFVTKKHTVFWVSNGHSQLVDAPEGASTLDCCFYD
CQTSRIVGLFTENGETLTDSINVSQWPLTWSGEKRAIQVTKQKEEEIEHPLADVLNINLN
QNGDVCATSTHIDSATSLIGLSNGSIVHSESGKTIRGFTGPIIHLFELAKEFRVASLVAA
GSAAAAAVSVGVPYAAAPPRSYIAVSGSSEVGIIDSQGQLKYMVPGNHAAITKLVTYVNL
PNVLGVKYLDGSKRLWSLETNAEFSDKLSAENWEIELHCLCSSGEDGQMFVDSRDSGLES
AGSWAVNLEPLLKSGNYVQVCRSILASISPQIEDGDDDPFYLLLAGLPPSSTVSGSLSTC
GAWVYDNGLLSVSHDLTAVFLPIVAALADTVYEAQEGKRLQLTTLKPLTSVKGFLTPSAT
ALAHTAVHSSSRLKRAAKQCLQAFFSDLRYDQESLLISIYSDNSNLLFDPADPTSSCISL
YIITAIARVTGLPEYTGHVCQVVRNGMETDSVLIQQSSLDCLHQLWPSLKPGLDHIVDIE
AVISCLARHAHLSSDCWSVINRVTRSNAPLLITALVFLLENLDKPLVVRITAIDVLSSFF
SHTRKSSSMDMFVPFVMHTACKMLNPDLLRHSTLQRGVSLQSKVTALLSQITQTFPYIVT
FHKPSQRLAVAIYPTATAVMIEKNVSRRRSSLSELNRDLDIKVTDTCSLIVYDLRIGSEY
AYLDPQEFNSNHAAPVWGLVFSPDGKMVAGLTGIGSNSVPGPDFDGETRVVVWQMETHGG
TFSSLFGNSANSSHSSQGVYSESVKFGKSRNVVERQVEILLYASVGKIGYRDKQTPSFEP
AKVESLGKVKSDGLRVTWVSETVLVVQGEGVKKKVVI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG