YALI0F02827g

Overview

Description similar to uniprot|Q12692 Saccharomyces cerevisiae YOL012c HTZ1 evolutionarily conserved member of the histone H2A F/Z family of histone variants
Locus type CDS
Locus tag YALI0F02827g

Location

Species Yarrowia lipolytica Positions 407340..407839
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 500 (nuc.)
Previous locus YALI0F02805g Next locus YALI0F02849g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F02827g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F02827gYALI0F02827g_mRNA-001YALI0F02827g_CDS-001

Nucleotide sequence

 

>YALI0F02827g
ATGTCTGGCGGAAAAGGAAAAGGCGGCAAGGGCAAGGGCGGCAAGGGAAAGGGCGGAAAG
GCATCAGCCGCTGTCGAGGGCGCCCAGCAGTCACATTCGAGCCGAGCAGGCCTGCAATTC
CCCGTGGGCCGTATCAAGCGATACATGAAGAAGAGCGTACAGAACAAGGTGCGTGTGGGA
GCCAAGGCGGCCATCTACATTGCGGCGGTGCTGGAGTATCTGACTGCTGAGGTTCTGGAG
TTGGCGGGTAACGCTGCACGTGATCTCAAGGTCAAGCGAATCACTCCTCGACACTTGCAG
CTTGCCATTCGAGGAGACGAGGAGCTGGACACCCTCATCCAGGCCACCATTGCCTATGGA
GGAGTCATGCCCCACATTAACAAGGCTCTGCTGCTCAAGGTGGAGCAGCACAAGAAGAAG
TAATATTGGTGGAGGATGGAGAACCACGGCTTATTGTATTTTTATAATCCTAGGATAAAT
GTATTTGTATATTGTTGTGT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F02827g_CDS-001

Protein length: 141 aa.
Product: Histone variant H2AZ, putative

>YALI0F02827g_CDS-001 MSGGKGKGGKGKGGKGKGGKASAAVEGAQQSHSSRAGLQFPVGRIKRYMKKSVQNKVRVG
AKAAIYIAAVLEYLTAEVLELAGNAARDLKVKRITPRHLQLAIRGDEELDTLIQATIAYG
GVMPHINKALLLKVEQHKKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG