YALI0F02805g

Overview

Description highly similar to uniprot|P19882 Saccharomyces cerevisiae YLR259c HSP60 heat shock protein - chaperone, mitochondrial
Locus type CDS
Locus tag YALI0F02805g

Location

Species Yarrowia lipolytica Positions 404505..406307
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1803 (nuc.)
Previous locus YALI0F02783g Next locus YALI0F02827g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F02805g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F02805gYALI0F02805g_mRNA-001YALI0F02805g_CDS-001

Nucleotide sequence

 

>YALI0F02805g
ATGCAGCGAGTCATTGCACGATCCAGCCGTCTGCGACCCCAGCAGATCCGAGGCTTTGCT
CACAAGGAGCTCAAGTTTGGCGTCGAGGGCCGAGCCGCTCTGCTCAAGGGTGTCGACACT
CTGGCCAAGGCCGTCTCCGTCACTCTGGGCCCCAAGGGCCGAAACGTGCTCATTGAGCAG
TCGTTTGGCTCCCCCAAGATCACTAAGGATGGTGTCACTGTTGCCCGATCCATCACTCTC
GAGGACAAATTTGAGAACATGGGCGCTCGTCTTCTGCAGGAGGTTGCCTCCAAGACCAAC
GAGACCGCCGGAGACGGAACCACCTCCGCCACCGTTCTCGGCCGATCCATCTTCACCGAG
TCCGTCAAGAACGTGGCTGCCGGCTGCAACCCCATGGATCTGCGACGAGGCTCCCAGGCC
GCTGTCGACGCCGTCGTCGAGTTCCTCCAGAAGAACAAGCGGGAGATCACCACTTCTGAG
GAGATTGCCCAGGTCGCTACCATCTCTGCTAACGGCGACACTCACATTGGCCAGCTGATT
GCCAACGCCATGGAGAAGGTCGGCAAGGAGGGTGTCATCACTGTCAAGGAGGGCAAGACC
ATTGAGGACGAGCTCGAGATCACCGAGGGTATGCGATTCGACCGAGGCTACATCTCCCCT
TACTTTGTCACCGACGTTAAGTCCGGCAAGGTTGAGTTTGAGAACCCTCTGATTCTCATC
TCCGAGAAGAAGATCTCTTCTATCCAGGACATTCTTCCCTCTCTCGAGCTGTCCAACAAG
CAGCGACGACCCTTGCTGATCCTGGCTGAGGACGTTGACGGCGAGGCCCTGGCTGCTTGT
ATCCTCAACAAGCTGCGAGGCCAGGTCCAGGTTGCAGCTGTCAAGGCCCCTGGCTTTGGT
GACAACCGAAAGTCTATCCTCGGCGACATCTCCATCCTCACTGGTGGTACCGTCTTCACT
GAGGACCTCGATGTCAAGCCTGAGAACGCCACCGCCGACATGCTCGGTTCTTGTGGCGCC
ATCACCATCACCAAGGAGGACACCATCATCCTCAACGGTGAGGGCTCCAAGGACTCTATT
GCCCAGCGATGCGAGCAGATCCGAGCCTTCATGGCTGACTCCACCACCTCCGAGTACGAG
AAGGAGAAGCTGCAGGAGCGACTGGCCAAGCTGTCTGGCGGTGTTGCCGTCATCAAGGTC
GGAGGCTCCTCCGAGGTTGAGGTTGGCGAGAAGAAGGACCGTTTCGTCGACGCTCTCAAC
GCCACCCGAGCCGCCGTCGAGGAGGGTATTCTCCCCGGAGGAGGAACCGCTCTGCTCAAG
GCCTCTCGAAACCTGGACTCCGTGCCTACCGCTAACTTTGACCAGAAGCTCGGTGTTAAC
ATTATTCGAACTGCCATCACCAAGCCTGCTCGAACCATCGTTGAGAACGCCGGTGGCGAG
GGCTCCGTCGTTGTCGGCAAGCTCACTGACGAGTTTGGCGAGGACTTCAACATGGGTTAC
AACGCCGCCAAGGGCGAGTACACCGACATGATTGCTGCCGGTATCATCGACCCCTTCAAG
GTTGTGCGAACCGGTCTGGTTGACGCTTCTGGTGTCGCCTCTCTGCTCGCCACCACCGAG
TGCGCCATTGTCGATGCTCCTGAGCCTAAGGGACCTGCTGCTGCTCCTGCTGGCGGCATG
CCCGGTATGGGTGGTATGGGAGGCATGGGAGGCATGGGCTTCTAATGTGCTAGATGTAAA
TATGTAAATATGATTTATGAACGAGTTAAACGAGCTCAGCGAGTTTGGCTCGTGTATTTG
AGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F02805g_CDS-001

Protein length: 575 aa.
Product: Tetradecameric mitochondrial chaperonin, putative

>YALI0F02805g_CDS-001 MQRVIARSSRLRPQQIRGFAHKELKFGVEGRAALLKGVDTLAKAVSVTLGPKGRNVLIEQ
SFGSPKITKDGVTVARSITLEDKFENMGARLLQEVASKTNETAGDGTTSATVLGRSIFTE
SVKNVAAGCNPMDLRRGSQAAVDAVVEFLQKNKREITTSEEIAQVATISANGDTHIGQLI
ANAMEKVGKEGVITVKEGKTIEDELEITEGMRFDRGYISPYFVTDVKSGKVEFENPLILI
SEKKISSIQDILPSLELSNKQRRPLLILAEDVDGEALAACILNKLRGQVQVAAVKAPGFG
DNRKSILGDISILTGGTVFTEDLDVKPENATADMLGSCGAITITKEDTIILNGEGSKDSI
AQRCEQIRAFMADSTTSEYEKEKLQERLAKLSGGVAVIKVGGSSEVEVGEKKDRFVDALN
ATRAAVEEGILPGGGTALLKASRNLDSVPTANFDQKLGVNIIRTAITKPARTIVENAGGE
GSVVVGKLTDEFGEDFNMGYNAAKGEYTDMIAAGIIDPFKVVRTGLVDASGVASLLATTE
CAIVDAPEPKGPAAAPAGGMPGMGGMGGMGGMGF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG