YALI0E32417g - YAS2

Overview

Description uniprot|Q6C3S8 Yarrowia lipolytica YALI0E32417g YAS2 Basic helix-loop-helix transcription factor essential for cytochrome p450 induction in response to alkanes
Locus type CDS
Gene name YAS2
Locus tag YALI0E32417g

Location

Species Yarrowia lipolytica Positions 3842592..3844760
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2169 (nuc.)
Previous locus YALI0E32395g Next locus YALI0E32439g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32417g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32417gYALI0E32417g_mRNA-001YALI0E32417g_CDS-001

Nucleotide sequence

 

>YALI0E32417g
ATGCACCTTTCCCACCCACAGGAGAAACAAGTCTTCATCACCACTCCGTCCCCGTCGTCC
TCTGTTTCAACCCAGTCCACCGCCTCGTCGTCACTGTCGCTATTCCACACGGCAGACTCC
GATCTCTCCGCCTCCGAAGAAGACGACTTTCCGTACCACGCAACAACCCACACAAATATA
AAGCCTGGTGTGTCTTTCTCCGCCACCTCAGGCACAATGATGAGTGCGTTATCCCCTGTC
TCGGTGCAGTCTCCGTCGACCGTTTTCATGATGAAGGAACCCGCACAGGCACAGGCCCAG
ATGTCCCACGACAACAACAACAACAACAACAGTAGCAGCCATGTCACCACCCCTAAACAC
AACGCCGCCCCTGTAACCAAATCAGACGACCCCTTCGATGTCGACAACTACCCCACCGAC
TTTGACTCCGCCTTCCTCAACCTGTCGCCCACCATGGGGATGGGCCCCGGCGACGGCATG
GATGGTATTCCGCTGTTCAACGCAGAGGAGGAGTCCGCTTTCTCGTCCTTCCTCGACAAC
GTGGCTCTGGATCCTAACTTCATCTTCGAGCCCAATCTCTCTGATGCCCTGCCCAAGTGG
CCCGAATCGAAACCCTGGGGCCCCAACGACTCGCATAAGCCACGAACCGACAAGTTCACC
AAGTTTGGCAACTCTCCCGGTCTCGATTTGCTCGCTGCCAATTCCCCCGACGCAGTTAAC
ATCCACGAACGCCTACTGAAACACGAGTCGAAGGAGTATCTCAGCCCCAACCACAACGAC
TATGCTCAGAGCGACTCGCGGGCCCAGGCGCTCGCCATGGCTGAAACACAGGGCTACGGA
CAGCTAAAACACAAAGAAAGCCGCTCATCGTTATCACAGCCCTCGTCGCTACACAACAAC
AGCGTGACGGGGTCGTCAGTCACAACCACACGTCCCTCGCCACAAACGTCGGGACCCTCC
CCCGTGTCGTCGGGCACGTCAGCGGCGTCGTCCGCACCCATGGGCCTTCATTTCGGCTCA
GACCCTGCATTTGGAGGCTCCAGCTTCCAGCCCAACAGCGGCACCCCAGCCCTCAAAAAG
GTGCGGGGCTTCGACGAGCTGCCCCCTGCCGTCCACGAGGGACACGGGCACATGCACATG
CAGCCACAACGCATGGTGACCGGTCTGGAGGGTGTAGTCAACCCCAAGCTGGTGGTTGCA
GCTGCACAGATGAGCCAGGGCGTGACGGACCAGAACATCTTCATGCTCAAGCGACGAAAG
TCGGACAACATGGCTGCAAGCATGAACTCGAACGTGCCACACGATATCTATGCTCCCGTC
CCACATGCTGAGCAGATGTATCATATGCAACAACAACAGCAACAGCAGCATCTCCACCAG
CAACAGCAGCAACAACATCACCAACAATCACAAAATCAGCATATCCAACAACAGCAGCAA
CAGCAGCAGCATCAGATGCACCACCCTCACCATACACAGCAGCACTTCCAGGCACGAATG
CACTTTGGCGACGGCATGGATGGCGAGGTGTCCATGAGTACCGTCTCTCAGGCGGGTTTG
CACATGAACTCCAACCCTAGCATGTTGTTCCCCGACAAGGATGCTCTAGCAGACTCGTAC
CAGCAGCAGCAGCAGCAAATGCATAGTCAACACAACCCTCCTTCGCATCATCCTCAGCAC
AACCAGCAGCAGCAGCAGCAACCGCAGGTCAAGACTGAGCAGAATATGTCTGCATCGCCT
ACTCCGGGATCTCCCAACCTCACGGAGGACCAGAAACGTATGAACCACATCTCTTCCGAA
AAGCGACGGCGGGATCTCATCAAGCAGGAGTTTGAGGAAATGTGCGGCCTGGTGCCTCGT
CTGGCTGCAAACAGCGATGAGAAGGGCAAGCGACGCCATGGTCATCGAGGACGTATGCCC
AAGGACTCGGACAAGGACAAGGATACTGGAACCAAGTCCAAGTCGATTCTACTATCGATT
GTGTACGAATACATGTGCGAGCTGGTGGAGCGAAACAAGGCCATGCGGGGCATGATCACC
GAAAAGGGCGGATATCACAGCGATATCGCCAATGCTCTTCATCCTCCCAAGATTGATGAG
TAAATGCCACAATCACCCGGCAACAAAACCCCAATTTATATATTTAACAGTGCATTTCTT
CGGATACAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32417g_CDS-001

Protein length: 701 aa.
Product: Basic helix-loop-helix transcription factor essential for cytochrome p450 induction in response to alkanes
Gene: YAS2

>YALI0E32417g_CDS-001 MHLSHPQEKQVFITTPSPSSSVSTQSTASSSLSLFHTADSDLSASEEDDFPYHATTHTNI
KPGVSFSATSGTMMSALSPVSVQSPSTVFMMKEPAQAQAQMSHDNNNNNNSSSHVTTPKH
NAAPVTKSDDPFDVDNYPTDFDSAFLNLSPTMGMGPGDGMDGIPLFNAEEESAFSSFLDN
VALDPNFIFEPNLSDALPKWPESKPWGPNDSHKPRTDKFTKFGNSPGLDLLAANSPDAVN
IHERLLKHESKEYLSPNHNDYAQSDSRAQALAMAETQGYGQLKHKESRSSLSQPSSLHNN
SVTGSSVTTTRPSPQTSGPSPVSSGTSAASSAPMGLHFGSDPAFGGSSFQPNSGTPALKK
VRGFDELPPAVHEGHGHMHMQPQRMVTGLEGVVNPKLVVAAAQMSQGVTDQNIFMLKRRK
SDNMAASMNSNVPHDIYAPVPHAEQMYHMQQQQQQQHLHQQQQQQHHQQSQNQHIQQQQQ
QQQHQMHHPHHTQQHFQARMHFGDGMDGEVSMSTVSQAGLHMNSNPSMLFPDKDALADSY
QQQQQQMHSQHNPPSHHPQHNQQQQQQPQVKTEQNMSASPTPGSPNLTEDQKRMNHISSE
KRRRDLIKQEFEEMCGLVPRLAANSDEKGKRRHGHRGRMPKDSDKDKDTGTKSKSILLSI
VYEYMCELVERNKAMRGMITEKGGYHSDIANALHPPKIDE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG