YALI0E32285g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E32285g

Location

Species Yarrowia lipolytica Positions 3828332..3829797
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1466 (nuc.)
Previous locus YALI0E32263g Next locus YALI0E32307g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32285g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32285gYALI0E32285g_mRNA-001YALI0E32285g_CDS-001

Nucleotide sequence

 

>YALI0E32285g
ATGTTGCCGCCCGAAGTTGTCTGTGAGGTTGCTGAGTACCTAGACTTGGAAGATCTGGTG
GCTCTGGGATTGGCTTCCAGTTTCTGGAACGAGGGCATTCCGGACTCCGTCTATCGAGTG
GCTCTACACAAACGCTGTCCCTTCTACGACCTCGAAAATTCGCCCAGACAGAGCTGGAGA
GAATGCGCCCGAGTCCATGTTCTCCGAATGAGCCCAAACCCGGATCATTGGAGACCCTAC
ATGCAATTTAACCGACACCAGGTATCTCCTGGCATCTTTGATTCGAACGGCGACGGCATT
CCTTATGAGTTTTGCCAAGCAAACGATAAGACAATCTCCTCGTGCAAGGATGTGTGTTTA
CAGGAGGGTTTCGAGTCACTTGTGGACCCGTACGGAATCGTGCAACACAGAGGCACTACT
CTATCCCAGTCTACAGGTACCTCTGTGGTGGTCATGAAGGATGACCATAATTTTGAGGGA
GTCAAACTGTGCCTTGGACACGAGACACAACAACAATCACAATCAACAGCACCCGAGAAA
CGAATCAGCTTTATTAAACGAGGAACCATCGTTGAGGATCACGACCATATCGTCACTCCT
GACGTAGACGTTGCATGTACCGTTTTCTCGTCGTTTTCGGACAACTCCAAAAAGTACTTT
GGGGAGCTCAACTTCAAAAATGCCGTGGTTCCTTTCACCCTCGCATACTCCATGGATCAG
GGCCGCATTAAGGTGAAGCTTTTCGAAGCGTCTGGGAAGTTGTACATGACGATCCGCCAG
CTCGTATTCCATAAGATCGACATTTATGAGATAAACGAGTCGAAGACCGCCATCACCTAC
AAGAGCACTTGGTCGCCTGAAGAGGCCCATGACGAAATCATCACCCAGAGATTCATGTGG
TATGATGGTTGTGTTATCAAGTGGTCCTTCTGTGGTAAGTCTCTGGGGCAAGCTTCCAAG
AGATTGCAATTTAGCACCTATGACATGAGAGAAGAAGAGATTTCCACCTTCTTTAACTGC
GGCAGAGACGACATTCATGACCTATTCCCTCATCCTAAGTATCCCAGATATGTCATGATC
TTCACCAGAGGCCGCCAGTTGACTGGTGTGTGGGATCTCAAGAGTAGGTCATTTTCTGTG
GACCCTTCTTCCGACTCTGACGTTGCTCTTTCATTCCCAGGGCTACTTAACGGCAAACTG
GGATTCTGGTCATATAGCGATGCTTACATGGCCAAGCTGACTAAGGAACAGACGGATCTG
GATGGCGAGTGGATCGATACCGCGTTATTTCCTTGCTCTGCCATGCCAAGTTTGACCAAA
ACTCTGCATCACAAGTTCCCCAGTCTAGCTCGAAGATTGTTCGGTTCTTAAGCAGCTGTG
AGTCATTTCTCATATCTGCTTCATATTTCCCTTCACTCACTCACTCATAACATTCTCTAT
AAGTTATATATTGCTCATCTTTCCAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32285g_CDS-001

Protein length: 457 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E32285g_CDS-001 MLPPEVVCEVAEYLDLEDLVALGLASSFWNEGIPDSVYRVALHKRCPFYDLENSPRQSWR
ECARVHVLRMSPNPDHWRPYMQFNRHQVSPGIFDSNGDGIPYEFCQANDKTISSCKDVCL
QEGFESLVDPYGIVQHRGTTLSQSTGTSVVVMKDDHNFEGVKLCLGHETQQQSQSTAPEK
RISFIKRGTIVEDHDHIVTPDVDVACTVFSSFSDNSKKYFGELNFKNAVVPFTLAYSMDQ
GRIKVKLFEASGKLYMTIRQLVFHKIDIYEINESKTAITYKSTWSPEEAHDEIITQRFMW
YDGCVIKWSFCGKSLGQASKRLQFSTYDMREEEISTFFNCGRDDIHDLFPHPKYPRYVMI
FTRGRQLTGVWDLKSRSFSVDPSSDSDVALSFPGLLNGKLGFWSYSDAYMAKLTKEQTDL
DGEWIDTALFPCSAMPSLTKTLHHKFPSLARRLFGS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG