YALI0E32307g

Overview

Description some similarities with uniprot|Q90941 Gallus gallus PB1 Polybromo 1 protein
Locus type CDS
Locus tag YALI0E32307g

Location

Species Yarrowia lipolytica Positions 3830190..3831768
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1579 (nuc.)
Previous locus YALI0E32285g Next locus YALI0E32329g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32307g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32307gYALI0E32307g_mRNA-001YALI0E32307g_CDS-001

Nucleotide sequence

 

>YALI0E32307g
ATGACCACTCGTGACGAACGCGACTTCCATCCACCACCTAACCTTGCCGACGTTAAAACC
ACCATTACATCGTCACAACCACGCGAAATCATGTCTGACAAACGAAGGGCATCATCGACT
CTGGCAGCAGACGCCCGCAAGAAGGCCAAGGGCGAGATCAAGCCATCGCAACTGTCGCTG
TTTCTGGCCGAGGTTGTAGATAAAATCAAAAAGGAGGAAACCGAGAGCTACGAGAACGAC
GGAACTACACGACTGCTTGCTGGAGAGTTTCTGGAGCTGCCATCGAAGCGGTACTACCCT
CACTATTATGAGGAGATCCAAAAGCCAGTTTCATTCAAGGAAATTGATGCCAAAATTGCT
ACCAATGGTTACGTCAACATTGACCAGTTTGAGAAGGACCTCAAACAGATGGCCAACAAC
GCTGCAGCCTTCAACGACAAGGATAGTGTAATTGCTCAGGATGCGCTTAAGATTGCCAAA
CTCGGTGTGGCCGACGCTCGAAAGTACACAGGCGAGCAGGAAGAGGTCAACGACGACGAC
CTCAAGGACGAGATTCTGGAACTCTTCTCAGACGCAGCCATCGACATTCTCAATGATCTG
GCTACCTTCAAGTACAAGGCCAAGCGGACCTTACCATGTGAGCCGTTCATGGTTGAGCCC
GACAGAGATCTTTATCCCGATTACTACGAAGTGATTGAGACGCCCATGTCCATTGCCATT
TTAGAGAAGATGGTCAACAACAGAGAAGTCAAGAACTTCGATGATCTTGAGAGCAAATTA
CAGATCATGATCGACAATGCGAAGCATTATAACGCCGACGGATCGCCCATTTACGTCGAT
GCCATTCTGGTTGAGAAGGCCATTCCCCAAAAGGTGGAGAAGGGACGAAAGGCGTTTGGA
GAGGAAAACCTGGCTACGCTGCACAAGTTCTTCAAACCCAAACAAAAGCTGAAACTGACA
TTGAACAAGCCTGAGGCGACAGAAGAAGCTGAGGAGAAGAAGCCAGAGGAGCCTCTGACG
GTGCTTCCTCCTAACGAGAATCCTCTGCGAGCTCCTGGACGGGCTCCTCTGGTGCGTCTT
CTCACCGTGCACTCTACTCTGCCTATCAGACAGCAGCTCAAGCAGATTCCCGAGAGCCAA
CAGGATCCGTTCCAGATCAACATTCCTGCTTCCCCCACACACGCGCTTCAGAACCACACG
TTTGCTCTGCCTGCGTACCACTCCACCATCAGTGTGGACGCCGAGCTTGACAACTCACTA
TACGAGCGTCCCTACAACCTACAATTGACTCTAAACTCTGCTCGAATCCAGCCCATCTAT
CTGCCGTCGAGTGCTTGGGGATCCCAGAAGGATCTGCAGGGGCGGTATGAGCTCCGTTTG
GCGCCTGGTCTTAACCGCGTTGACGTCAGTGTTGACGCGGCCCCTGCCAACGCTCCCCCT
CAGCGTACAGCCCATGCTCAGTTTGAGGAGCATGAGAGATTTACATTGTGGGTTCATCTT
ATGTAAACTAATTAGTGCGTCTGTGGGCAACGTCCCCAAGATGTCTATCTAAAGTAATTT
ATTATGAACTTGTTTCGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32307g_CDS-001

Protein length: 502 aa.
Product: Conserved hypothetical protein

>YALI0E32307g_CDS-001 MTTRDERDFHPPPNLADVKTTITSSQPREIMSDKRRASSTLAADARKKAKGEIKPSQLSL
FLAEVVDKIKKEETESYENDGTTRLLAGEFLELPSKRYYPHYYEEIQKPVSFKEIDAKIA
TNGYVNIDQFEKDLKQMANNAAAFNDKDSVIAQDALKIAKLGVADARKYTGEQEEVNDDD
LKDEILELFSDAAIDILNDLATFKYKAKRTLPCEPFMVEPDRDLYPDYYEVIETPMSIAI
LEKMVNNREVKNFDDLESKLQIMIDNAKHYNADGSPIYVDAILVEKAIPQKVEKGRKAFG
EENLATLHKFFKPKQKLKLTLNKPEATEEAEEKKPEEPLTVLPPNENPLRAPGRAPLVRL
LTVHSTLPIRQQLKQIPESQQDPFQINIPASPTHALQNHTFALPAYHSTISVDAELDNSL
YERPYNLQLTLNSARIQPIYLPSSAWGSQKDLQGRYELRLAPGLNRVDVSVDAAPANAPP
QRTAHAQFEEHERFTLWVHLM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG