YALI0E32109g

Overview

Description similar to uniprot|P35177 Saccharomyces cerevisiae YBR081C SPT7 Subunit of the SAGA transcriptional regulatory complex
Locus type CDS
Locus tag YALI0E32109g

Location

Species Yarrowia lipolytica Positions 3811437..3814838
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 3402 (nuc.)
Previous locus YALI0E32087g Next locus YALI0E32131g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32109g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32109gYALI0E32109g_mRNA-001YALI0E32109g_CDS-001

Nucleotide sequence

 

>YALI0E32109g
ATGACGTCGCTGAACGTGTGGGCCTCCGGGCGATCACGTGATCTGCTTGCCGTCGCCCGC
GAAATTGAAGCCAAGGATCTCTGGCGCGGCTTTCTCACCATCCAGGAACACCAGGTCGTG
CAAAAAGTGCTGGAGAACGACGCCATGTGGGACAACCTGGTCGAGGGCAAACTGTCGATA
TTTGTCGACAATCCGTTGCCGGATCCCCCGCTGGGATTCAGGCAGGAACAGGAAAACGCC
GCCAACAACAATCTGGATGGAGCACGTCCCGAAACCCCGACTCCAAGTACACCCGTGGTG
AGCACATCGTCCTCCTCAACGCATCTGCATCTGAAGCATCTGCAGATGAATCAGCCGTCG
CCGACTCCGTCGAATGAAGGCTTTCAGAAGACCGTGTCGCTGGACTGTGTCGCGTTGGCC
TTCAAGGTGCGGCACATGATTTTCGACAAGTCTGTGCCGCTGCTATACCCCAACATCAAG
GGAGGGGACCTGGAGGTGGACATTGAAGACATCCTGGCAGAACGCAAAAAGGAAGAGACT
CCTGCCCAGATCAAGGCTGCTCCTGTACGAGAGGAGGAAGATGACTACGATTTTGATGAC
GAAGATGAGGGTCCCAAAACAGACGGAAACAACAACAAGGACCAGCATACGGACGGTAGC
AGTGTAGCACTAGTGGACTCGGTATCGGTCGAAGACCGACCAGCGACCTCCGACGATATC
CAAAAACGAGACTCGGCTCTGTTGGCCCGGATATGGCAACGGTACCATCTGTTTGAAAAT
GACAGCGAGGCCATGGACTCGTATCTGGCCGAGGAGGGAAGCCAGGAGTCGGAGAACACA
GGGGAAACAAACACACAGGAGGAGCCGACCAAGGCGAATTTTGGAGCCGCAAATCTGTCT
CTAAAGGTGAGCATCTTCATTACTAACGACCTTCCTATTATTTATACTAACACAGAACCT
CTTGGCCACAATTGAGTCCAAGCGAGACAAGTTGTCTCTCACAGACACCCAGCTGCGTAA
GCTGATTCTGGACGTGCGCAAAAACCGATCCAAGTGGGCCAACGAAGAACGTGTAGGCCA
GGAGGATCTTTATGAAGCTGCAGAGAAGGTGGTTCTCGAGCTACGAGGCTACACAGAGCA
CTCAACTGCATTTCTCAACAAGGTCAACAAGCGGGACGCGCCCAACTACTTCAGTGTCAT
CAAGGAGCCCATGGATCTCAACACGGTCATGAAGAAGCTCAAGAACCTCCAATACGACAG
CAAGAAGGACTTTGTCAACGACCTAATGCTCATCTGGCAAAACTGCTTGACCTACAACAC
TAATCCCAAGCACTTTTTGCGAGCCCATGCTATTGCCATGCAGAAGAAGACGTTGACGCT
CATTCCTCTCATCCCCGACATCACCATCAAGACACGGGCCGAGGCAGACGCAGAGGAGGC
CGCGCAGGCTCAGGAGGCCAAGGAAGAGGAGGAAAAAGAGCAGGGAGGTGCCAAGGCTCG
AACAGGAATGTCTATTGGCAAAACTGTTGGGAAGGGCCAGAAAGGAGGAAAAGGCCAGAA
GGGAGGCCGAAAGCGGAAGATTGAGGAGGTGGATGAGGATGCTAAAGACGCCGACGACTC
TGACATCAAGGTTGAAGATGTGTCTATGGACGTCGATGTTGATGGTAACAACAAGACTTC
GGATGATATTAAGCCGGATACCAACAACAACGATATCAAGACCGAGACCAAGGAAGCCAC
CGAAGAGCCCGAGTCGGCGAACGTGTCTGCCTTGGTCCCCGCTGGCCATACTGGTGCCAA
GGAACTGACTGCTTCTGCTGAGAATAATGATTATGGGGTTGGTGGTGATTCCGATGACGA
TTCGGACAATGATCTCGAGGAGCAGTTCTGGACTGAGTACACTGGCCGCAAACGGACGCT
CATTTCCGTGCAGCGGTCGCGGCTGTTTAAGGACAACAAGATACAGGCAGACGCAGACGC
TACTGTCATTTCCAAATCAAAGGGGTTCCGTGACTTCCTTTCAGCCGAAGCAGCAGTGCG
AGGAGTCGGTCCCCACATGGAGTTTGAGGAATTCCAGGAGGACTTGCTGGAGGAGGCAGC
AGAGGTGAATGATAGTACACAGCCCAAGGCTGATGCTCCATTAAACATTCCCCGACGGCC
GTTTTTACTTGAGTACGACCCCCAGGCCGGCCTTCCTGAGCTCCCCTGGGCCATTTCATG
CGACAACCCCGACGAAGGAATTGACGACACTTGGAGCCATGTTGATATTGAGTGCCTCAA
GAACACTCCTTCTCGATACGTTGCCCCTGCGAAGGGTCTAGTCAGCAAGATTGACCACAA
CTTGAACGAGATGCAAAAGATTCGAAAGATTTGCTCCAAAATTTCTATCATCCGACAAAT
GCAGCAGCAGTATCTGCATTCGTCGCAGATAAAGGCCTACAATCCGCCTAAGATCACCGA
TTTTGATGTGGATATCGAGTCTCGTCTTCCTAATAGAGATGAGTACGATAAAGAGGTGTG
TGAGGCTTCTCTGAAACGAGCGGCTTCTCGAATTGCTATGCACTCTGGTTTTGAGTCGAC
CGAGTCGTTTGCCATCAACGCACTCACAGAGATTGCGGGCGACTTTCTATCCAACCTGGG
ACGTTCAATGGTGGCCTACACTCAGCATTTCAAGAACACAAACACCAGCAAGGAGACGAT
TCTGAAGGAGACTCTGGAGGAATCGGGCGCGGGGTCTATCGAGGGGCTGTCTGCGTACAT
CCGAGATGACGTTGAGCGTCACGGCCATAAGTTGGTGGATCTCAAGAACAACCTGGGGTC
TTTCTTGGGCGATCTGCTGCGACCTGGAGGTGGTCAGGGAGAGATGACAGACCAGCAGTT
CAAGGACAACTCCGAGCAATTTGTTAATGGAGACTTTTCCGAGGCGATTGGCGACGATTT
CTTTGGTTTCAAGGAACTCGGTCTCGATAAGGAGCTCGGTCTTCTTACTTCCACCGTTCC
TCTGCATCTTCTGCAGGGCAGACTCAACGGAGCTTTCAATAGAGACAATGTGGAAAGTGT
GGGTACTGTGGAGGAGCTGGAGGCCCCCGAATACGATCCTATCGACCGAGAATCTGCTGA
CTCTCAGATTGGTCTGATTCGCCCCTTCCTTCATGGCAAGCTTGAAGTTGCCGACGTCAT
TCCTGAGGGCGAACAGGTGCCTGTCAAGCAGCGAAATGTGCGATCCAAGCTGCCGCCTAG
TGGAAAGATCCCTGGTCCCAAGAAGCGGCCCGCCAGCAAAATGTTCTGGCGAAAGCCCAG
TGATAACGAAGTGTTTGCCTAGGAAGCAAACATGTATAATTGTCTGGCGTATGTAATATG
TCAGCGTGTAAATTATGTATTGATAGATTATTGTGATAGGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32109g_CDS-001

Protein length: 1091 aa.
Product: Subunit of the SAGA transcriptional regulatory complex, putative

>YALI0E32109g_CDS-001 MTSLNVWASGRSRDLLAVAREIEAKDLWRGFLTIQEHQVVQKVLENDAMWDNLVEGKLSI
FVDNPLPDPPLGFRQEQENAANNNLDGARPETPTPSTPVVSTSSSSTHLHLKHLQMNQPS
PTPSNEGFQKTVSLDCVALAFKVRHMIFDKSVPLLYPNIKGGDLEVDIEDILAERKKEET
PAQIKAAPVREEEDDYDFDDEDEGPKTDGNNNKDQHTDGSSVALVDSVSVEDRPATSDDI
QKRDSALLARIWQRYHLFENDSEAMDSYLAEEGSQESENTGETNTQEEPTKANFGAANLS
LKNLLATIESKRDKLSLTDTQLRKLILDVRKNRSKWANEERVGQEDLYEAAEKVVLELRG
YTEHSTAFLNKVNKRDAPNYFSVIKEPMDLNTVMKKLKNLQYDSKKDFVNDLMLIWQNCL
TYNTNPKHFLRAHAIAMQKKTLTLIPLIPDITIKTRAEADAEEAAQAQEAKEEEEKEQGG
AKARTGMSIGKTVGKGQKGGKGQKGGRKRKIEEVDEDAKDADDSDIKVEDVSMDVDVDGN
NKTSDDIKPDTNNNDIKTETKEATEEPESANVSALVPAGHTGAKELTASAENNDYGVGGD
SDDDSDNDLEEQFWTEYTGRKRTLISVQRSRLFKDNKIQADADATVISKSKGFRDFLSAE
AAVRGVGPHMEFEEFQEDLLEEAAEVNDSTQPKADAPLNIPRRPFLLEYDPQAGLPELPW
AISCDNPDEGIDDTWSHVDIECLKNTPSRYVAPAKGLVSKIDHNLNEMQKIRKICSKISI
IRQMQQQYLHSSQIKAYNPPKITDFDVDIESRLPNRDEYDKEVCEASLKRAASRIAMHSG
FESTESFAINALTEIAGDFLSNLGRSMVAYTQHFKNTNTSKETILKETLEESGAGSIEGL
SAYIRDDVERHGHKLVDLKNNLGSFLGDLLRPGGGQGEMTDQQFKDNSEQFVNGDFSEAI
GDDFFGFKELGLDKELGLLTSTVPLHLLQGRLNGAFNRDNVESVGTVEELEAPEYDPIDR
ESADSQIGLIRPFLHGKLEVADVIPEGEQVPVKQRNVRSKLPPSGKIPGPKKRPASKMFW
RKPSDNEVFA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG