YALI0E32131g

Overview

Description weakly similar to uniprot|Q99220 Saccharomyces cerevisiae YDR057w YOS9 plays a role in ER to Golgi intracellular trafficking of GPI-anchored proteins
Locus type CDS
Locus tag YALI0E32131g

Location

Species Yarrowia lipolytica Positions 3814890..3816627
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1738 (nuc.)
Previous locus YALI0E32109g Next locus YALI0E32153g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32131g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32131gYALI0E32131g_mRNA-001YALI0E32131g_CDS-001

Nucleotide sequence

 

>YALI0E32131g
ATGTTGTTAAAGTCCCTGGCATTGATAGCAAGCTCGTCGCTCGCAGCAACCTTCAACATA
GGAGACGATCTCTTTGCCGACCCACAATTCACAGTACAGTTCCACAACCGACCATTGCGA
CAAGCAGATGTCCAGAACGGCCTGCTACCGCATCGAGATCCGGTATATGGCCATCCCCTG
GGGTACGAGATGATGCAATTCAACGGCACAAACCACATCTGCGGTATTCCGGAAGTCACG
ACCACGAAGAGCTCAAAATCACGAGAGGAGGGAGAACTGTCGCCAACAGAGGCCCGAGAC
AGAGCTTTGGAGCTCATGTTGCCTCTTCTGGGTGACTGTCTCTTCTACGAACAGGGATTC
TTCTCGTATCGTTTCTGTTACGGCTCGGGAGTCGTTCAGTATCGAAGACATGGAGACAAT
TACTTCCCTCGAATCTATCCTCCTCCTCAGGCAGACGATTCGCCCACGTTCGTGCTCGGT
AGCTTCGAGAAGGACGATACGACCAACACGGTCACCAGTGCCGGAGGAATCCCCTTTCTG
GCCCATAGACTCCGTTCGGGAACCCATTGTCCTCTGACCGGCGCCAACCGAGAAATCGAG
GTTCAGTTTGTATGTGACAAAAACGTCCAGCATGACCATATACTGTGGATCAAGGAGAAG
CGAACGTGCAACTACGTCATGCAGGTCGGCACCCCGCGCCTCTGTAAAGACATGAGGTTT
CAGCCTCCTCCAGATGAGTCTTTGCCCATCATGTGCTACAGCGTCGAGTCTGAGGCCCCC
GAGTTTGAGACCATTGACGGCATGTTTGACGGCGTTGCTCACGTGAAGGAGGAGCAGGAG
GCTGTCTCGGCTCGTGCCCACCAGTTTGTCGGATCCAATGTCAACAAGGACAAGATTGAC
GAGATTGAGGTTGCATGGAGATTCACCAAAGCTCGAGCTCTCAACTACATTGGAGTCTGG
CTCGGCGACTGCGTCAATAGACAGACACTGTTCAAGGAGCTTGGCATTGCCACTCCTTCT
CATGATGCTCCTTTCATCATCCAGACCAGATCCATGTTTGTTCCTGCTCCCATCAACCGC
CACTTTGAGGTGCGTCTCATGATCACTCGTCAGCAGCTGCTGCTCAGCATTAACGATGAT
GATGTGACTCTCGAAGAGAAGTATGCATGGTGGCAGGAACAGGGCGACATGTCAAACCTG
GAGATCCAGGGTCTTACTATGTTAGATGACGCTGGGATCGAGGATGTCCTTGCCAGAGCT
ACTGATGAAGTTATGAAGCAGCTTAACAAGGAGGCCAAGCAGTCCAAGAAGCTGGCCAAG
AAGAAGGAAGCTGCCTCGACTAAGAGGGAAGAGGCCAAAAAGCAAGTGGAGGCCTCGGTG
GAGGAAAAAGCTGTGGACTCAGCTGAAGATGATGGAACTGACACTGTCACTTCAACACAG
ACCTTCTTCCGGACTCAAACACTCTCCACAGCTGAGGCAGAATCTAAACAGATGCCAGAT
AAGGCCGAGGAGGACGAAGATGAAGATCTGATTGTCACCATGTACTTTGAGGATGGCGAG
TTCAAGATTGAGGGTTTCGAGGTTGCCGACTTTGAGGGCGTCAAGTCTGCCATGAAGGAT
CTCGCAGATAAAGAAGATGACGATGACGATTACGAAGACTATGGTCTGAGCGACTAGAGT
TCAAATACTCATATACTAATTCATGCATGATAAGAAATACAATTGGCCGGCTATAGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32131g_CDS-001

Protein length: 559 aa.
Product: Conserved hypothetical protein

>YALI0E32131g_CDS-001 MLLKSLALIASSSLAATFNIGDDLFADPQFTVQFHNRPLRQADVQNGLLPHRDPVYGHPL
GYEMMQFNGTNHICGIPEVTTTKSSKSREEGELSPTEARDRALELMLPLLGDCLFYEQGF
FSYRFCYGSGVVQYRRHGDNYFPRIYPPPQADDSPTFVLGSFEKDDTTNTVTSAGGIPFL
AHRLRSGTHCPLTGANREIEVQFVCDKNVQHDHILWIKEKRTCNYVMQVGTPRLCKDMRF
QPPPDESLPIMCYSVESEAPEFETIDGMFDGVAHVKEEQEAVSARAHQFVGSNVNKDKID
EIEVAWRFTKARALNYIGVWLGDCVNRQTLFKELGIATPSHDAPFIIQTRSMFVPAPINR
HFEVRLMITRQQLLLSINDDDVTLEEKYAWWQEQGDMSNLEIQGLTMLDDAGIEDVLARA
TDEVMKQLNKEAKQSKKLAKKKEAASTKREEAKKQVEASVEEKAVDSAEDDGTDTVTSTQ
TFFRTQTLSTAEAESKQMPDKAEEDEDEDLIVTMYFEDGEFKIEGFEVADFEGVKSAMKD
LADKEDDDDDYEDYGLSD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG