YALI0E31889g

Overview

Description weakly similar to uniprot|Q8EL71 Oceanobacillus iheyensis Hypothetical conserved protein
Locus type CDS
Locus tag YALI0E31889g

Location

Species Yarrowia lipolytica Positions 3790441..3792199
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1759 (nuc.)
Previous locus YALI0E31867g Next locus YALI0E31911g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31889g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31889gYALI0E31889g_mRNA-001YALI0E31889g_CDS-001

Nucleotide sequence

 

>YALI0E31889g
ATGATCTCCATCGGAACAGTGGGTGGAATCTACGGAACCCGTGAAAAGAGACTACATGCC
TATAGAACCCATATGCTGTTGACTGCTGCTATCGCCATTGGACTTTTTTGCCTCTACACT
CTGTCCAATGCTCTTTCGTCTCCCGTGATCTCCCACAGCAGAGACCAGCTGGGGGTCAGA
GAGTACCCCAAAGTGCCGAACTCCGGTATTTGTGACCCACAGTTTCCCGCTCACCAAATG
GACCACGTGACAATTGACGAGCTGGATTCGACATTGAACCTCACCGACCGTCTCGACTCG
TTGCTGGCCAAGAGCAGCTACAACAAGGGCAACTACTCGATCTCCATTTTTGGCCGGCAA
AACGTGCTGTATGAGCGATACTCCAACAAGACCAACAGCGACAGCATTTACCGAATTGCG
TCCATCACCAAAGTGTTCACTGACCTGGCTACCTTGATTCTTCGACAAAACCTCTCGCTC
AGTCTTGACGATGATGTGAGAAGATACATTCCTCTGAATCTCTCCGAAGAGTTCTCCAAT
GAGCGGGTATCATTGCGATCCCTGGGTTCTCATACCTCTGGATTCCCCGGTACCATTGCC
AATATTTTCAGCGACATTTACTGGGACGACAAAGAAGGCGTCCTTCAAACCCCTATTGAC
AACTCCACCTGTGACAGCTTCACGACAATGTGTCGCATGGAAGACATTTTGGCCCAGTTT
GAGAACTCGCACATGACTTCCATTCCCAACTCGTTCCCCGAATACTTCAATGAAGCCTTT
GGACTTCTAGGAGAGGTTCTGTCTAGAGTCGACCCCAAGGAACGGTCCTACGACGACATT
GTCATCCAGGAGATCCTTGAGCCGCTCAGAATGAATTCTTCTTTCTTCGACTTGCCTCAC
GACCTCGAACAAAGGGGAGTCTACGACCCCGTGGGTATGTTCAATCTGGATATCCAGAGT
ATGAGAGCCGCTGGGGGTCTCTATTCTACTGCGACAGACATGACCAGGTTCATTCAGGGG
ACTATGCTTGGAACGGCTCATCTTTTGTCTAAATTTGAGTTAGCAGAATGGTTCCAACCC
GTCGTTGCGCTTCCTAATGGCGATGAAATTGGGTTCCCCTGGGAAACGGTGTCTGTCTCT
CTAGGACGACGAACTACCAAGGTGTACACCAAGGGAGGATCCCTTGGACATCTTTCTCTG
TCGTTTGCAATTCCTGAAGTTGGACTAGGAGGCATCATCATGACTTCTGAGATTCCCGAC
TACGCCAAAATTGCTGCAGAGATAGCCAACGAGGTAACCCAGGTCGGAATCAAGTACCTG
GCTGGACTTTCTGAAAAATACACTGGCACTTACGAGGGTTATAACAGCCACGGTAACAAG
ATCGTCATCTCAATCGAGGTTAACGCACAGTCCCTATACGTCACCAGGGCATATATTGGC
GGTTATGATCTTCTCAAGGAGCAAAACACCTCCAGTGTTGGTCTTCAACCTACAGGACAC
GACGACCGCTTCCTCATTTCCAAAACCACAAAAGGATGCTTAGCGTGGGAGGCTAGAGAA
AGAGCCACTAGTAATTACCAGGGTCTGGATGTGCTTGTATGGAATGACGGAGAGTGGTTA
TTGCCTGCTTTCAACACAACTCTGAAGAAGACCAATCCTGTCGTCAACTCTGCCTGGGTT
GATCTTGGTAAGAAGATTGTTCTACCTAACCCCATCACTGGTTTGTTTGATGAATAGCAT
ATAACAAGACATATGCTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31889g_CDS-001

Protein length: 579 aa.
Product: Conserved hypothetical protein

>YALI0E31889g_CDS-001 MISIGTVGGIYGTREKRLHAYRTHMLLTAAIAIGLFCLYTLSNALSSPVISHSRDQLGVR
EYPKVPNSGICDPQFPAHQMDHVTIDELDSTLNLTDRLDSLLAKSSYNKGNYSISIFGRQ
NVLYERYSNKTNSDSIYRIASITKVFTDLATLILRQNLSLSLDDDVRRYIPLNLSEEFSN
ERVSLRSLGSHTSGFPGTIANIFSDIYWDDKEGVLQTPIDNSTCDSFTTMCRMEDILAQF
ENSHMTSIPNSFPEYFNEAFGLLGEVLSRVDPKERSYDDIVIQEILEPLRMNSSFFDLPH
DLEQRGVYDPVGMFNLDIQSMRAAGGLYSTATDMTRFIQGTMLGTAHLLSKFELAEWFQP
VVALPNGDEIGFPWETVSVSLGRRTTKVYTKGGSLGHLSLSFAIPEVGLGGIIMTSEIPD
YAKIAAEIANEVTQVGIKYLAGLSEKYTGTYEGYNSHGNKIVISIEVNAQSLYVTRAYIG
GYDLLKEQNTSSVGLQPTGHDDRFLISKTTKGCLAWEARERATSNYQGLDVLVWNDGEWL
LPAFNTTLKKTNPVVNSAWVDLGKKIVLPNPITGLFDE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG