YALI0E31405g

Overview

Description similar to uniprot|A3LYR0 Scheffersomyces stipitis hypothetical protein PICST_85080
Locus type CDS
Locus tag YALI0E31405g

Location

Species Yarrowia lipolytica Positions 3704248..3706287
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2040 (nuc.)
Previous locus YALI0E31383g Next locus YALI0E31427g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31405g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31405gYALI0E31405g_mRNA-001YALI0E31405g_CDS-001

Nucleotide sequence

 

>YALI0E31405g
ATGCGTACCGCATCTCTCACAACAGCAAAACTGCTCCTGACGCTCATAGCAAGGCTGCCT
CTTCTGCACGCCCTTCCTTACGGTGGGTTGTCACGAAGCGGCAGCTACTCTCCCTACGAA
CACGATGACGATACTCTGGACCCGGAATCATCTGACTTCTGGCTATACATGTTCGTCTCC
TTTGTGCTCGTCGTGGCTGGCGGAGTCTTTGCTGGTCTGACCATTGCTCTGATGGGCCAG
GACGAGGTCTACCTGCACGTCATCAGCCAGTCTGGCGAGTCACACGAACGAAAGGCTGCT
GAAAAGGTCCTGCGGTTACTCAAGCGAGGTAAGCACTGGGTTCTTGTCACCCTGCTGCTC
GCTAACGTCATCACTAACGAAACTCTGCCCATTGTCCTCGATCGATGCCTCGGTGGAGGC
TGGAGAGCCGTCGTCATCGCTACCGTGGCCATTGTCATCTTTGGAGAAGTGATCCCCCAG
TCAATCTCAGTCAGATACGGTCTCTCTGTCGGTGCCTACTTTGCTCCTTTTGTTCTCGGT
CTCATGTACATCCTCTACCCTCTGGCCTACCCCACTGCCTTGCTGCTGGACCACCTGCTT
GGAGAAGATCACGGAACCGTCTACAAGAAGGCTGGTCTCAAGACCCTCGTAACCCTGCAT
CAGACCATGGGAGTTGAGCGACTTAACGAGGACGAAGTGACTATCATCTCTGCTGTGCTG
GACCTCAAGGAGAAGCCTGTGGGAACCATCATGACTCCTCTGGATGACGTCTACACCATG
TCCTCCGATACTGTCCTTGACGAGAAGGTGGTTGACCAGATTCTGCAGGCTGGTTTCTCT
CGAATCCCCATCCACGCCCCCGGAGAGCCGACCAACTTCATTGGTATGCTGCTGGTTCGA
ATTCTCATCTCGTACGACCCCGAAGATGCTCTTCCCGTGTCCTCCTTCCCTCTCGCCACT
CTTCCCGAAACCAGACCCGATACTTCCTGTCTCAACATCCTTAACTACTTCCAGGAGGGT
AAGTCCCATATGGTCATTGTTTCGGAGTCTCCCGGCGACGCCTACGGTGCTCTGGGCGTG
CTCACTCTGGAGGACGTTATTGAGGAGCTGATTGGAGAGGAGATTATTGATGAGTCTGAC
GTATACATTGACGTCCACCGAGCTATTCGAAGAACCAATCCCGGTCCTCTGTCCAAGCGA
AATCTCGTTTCCTACGTGCAGAACTCTCCCCGAAACTCCATTGGCAACTACGAGTCCGTT
TCTCACTTCCTGTCTCGATCTCTTTCCCGAGATGAGGCTGGCAAGGTCCAGCATCAATCT
CACTCCAACCTCGGACCCCATGGCAGCTCCCAGCTTGCAGCTAACCCCACAATCACCGTC
TCATCTTCACCCAAGACTGGTCTCAAGCTTGGCAACAACACTGCTACTCCCCACGACGCG
TCCGCTCCCGGCCCCTTCCAGAAGAAGCACCATCGAATCGAGCCACTCAACCTGGCTGCC
AACCCCAAGGAAACCTCCAATACTAAGGTGACCATCAAGAAGTCCGGATCAGGCCACCGA
CCCACCGGATCTTCCGATCTTGTCCATCATCCCGATCACCCCGAGGGCGGAACTTCTACC
CAGTACGGCACTATCTTCGAGACCGAGCAGGGTGCTGTGGTTGATGCTCTCAATGATCCC
GAAATCAACACTCGTCTGTCTCCTCGAACCGGCATGTCTCCTCGAACCGCTGCAGTTAAT
GGTGTGAACGGGGCACGGCCCAGCGCCATTCCTTCCCGACCGGATCTGGGTACCGAAATC
CACTCGTTCCGATCCGGGGGCATCATCGAGTCCGTCGTCAACGTCCAGGGAGTCCACAAG
ACCATCATTGAGGCGGCTGTGTCGGATAATGACTTTGAAGAGGAAGATAGCCCCAAGTCC
TCCAACGGTAGCTCTCGTCGAGGAAGCCGCAGAGCCCTTCTCGACTCGTCCCCCTAGAGA
AAGAGGAAAAAACAACACAATCAAACAATTAGCATAATATAGGTGAAGTCTTTTATTGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31405g_CDS-001

Protein length: 659 aa.
Product: Conserved hypothetical protein

>YALI0E31405g_CDS-001 MRTASLTTAKLLLTLIARLPLLHALPYGGLSRSGSYSPYEHDDDTLDPESSDFWLYMFVS
FVLVVAGGVFAGLTIALMGQDEVYLHVISQSGESHERKAAEKVLRLLKRGKHWVLVTLLL
ANVITNETLPIVLDRCLGGGWRAVVIATVAIVIFGEVIPQSISVRYGLSVGAYFAPFVLG
LMYILYPLAYPTALLLDHLLGEDHGTVYKKAGLKTLVTLHQTMGVERLNEDEVTIISAVL
DLKEKPVGTIMTPLDDVYTMSSDTVLDEKVVDQILQAGFSRIPIHAPGEPTNFIGMLLVR
ILISYDPEDALPVSSFPLATLPETRPDTSCLNILNYFQEGKSHMVIVSESPGDAYGALGV
LTLEDVIEELIGEEIIDESDVYIDVHRAIRRTNPGPLSKRNLVSYVQNSPRNSIGNYESV
SHFLSRSLSRDEAGKVQHQSHSNLGPHGSSQLAANPTITVSSSPKTGLKLGNNTATPHDA
SAPGPFQKKHHRIEPLNLAANPKETSNTKVTIKKSGSGHRPTGSSDLVHHPDHPEGGTST
QYGTIFETEQGAVVDALNDPEINTRLSPRTGMSPRTAAVNGVNGARPSAIPSRPDLGTEI
HSFRSGGIIESVVNVQGVHKTIIEAAVSDNDFEEEDSPKSSNGSSRRGSRRALLDSSP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG