YALI0E31427g

Overview

Description similar to uniprot|G3BFJ9 Candida tenuis DEAD- domain-containing protein
Locus type CDS
Locus tag YALI0E31427g

Location

Species Yarrowia lipolytica Positions 3706851..3708391
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1541 (nuc.)
Previous locus YALI0E31405g Next locus YALI0E31433r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31427g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31427gYALI0E31427g_mRNA-001YALI0E31427g_CDS-001

Nucleotide sequence

 

>YALI0E31427g
ATGAGTGACCAGGTTTCCGATATGCTTGAGAAGCTGGAGCTTCAGAAGGAAAAGAACCAG
GCCGCCGCCACCGAGGCCAAGGTCGAGGAGGTGAAGGAGGATGATAAGAAGGATGTCAAG
GAGGAGCTTAATGAAGATGATAAGAAGGTGGCCAAGGAGGACGACAAAAAGGAAGACGCC
AAGGAAGAGTCCAAGGAGGATGCCGAGGAAAACAACTTGATCCAGACGGAATACGAAGTG
CGAGTGAAGCTGGCCGATCTCCAGGCAGACCCCAATTCACCCCTGTACTCTGCCAAGCGA
TTTGAGGATCTGGGGCTGGACGAGAACCTGCTCAAGGGTCTGTACGCCATGAAGTTCAAC
AAGCCCTCCAAGATCCAGGAGAAGGCTCTTCCTCTTCTGCTGTCCGACCCCCCTCACAAC
ATGATCGGCCAGTCTCAATCTGGTACCGGTAAGACAGGAGCCTTTTCGCTGACCATGCTG
AGCCGAGTGGACCCCAATCTCAAGGCCGTTCAGTGCATTTGTCTTGCTCCCTCTCGAGAG
CTGGCTCGTCAGACCCTGGATGTGGTTGATGAGATGAAGAAGTTCACCGATATCACTACA
CATCTCATTGTTCCTGAGTCTACCGAACGGGGCCAGAAGGTGACCTCCCAGATCCTGGTG
GGAACTCCTGGATCTGTGGCAGGTCTGCTACAGAAGAAGCAGATTGATGCCAAGCATGTC
AAGGTGTTTGTTCTGGACGAGGCTGACAACATGGTCGACTCCTCTATGGGCTCCACCTGT
GCTCGAATCAAGAAGTACCTGCCCTCCTCGACCCAGGTGGTGCTGTTTTCTGCCACCTTC
CCCGAGTCTGTGCTCGATTTGGCTGGCAAGATGTGCCCCAACCCCAACGAGATCCGTCTC
AAGGCCAACGAGCTCAACGTGGACGCCATCACCCAACTGTACATGGACTGCGAGGATGGC
GAGGAGAAGTTCAAGATGCTGGAGGAGCTGTACTCCATGCTGACAATTGCATCGTCGGTC
ATTTTCGTCGCTCAGCGGTCCACCGCAAACGCTCTCTACCAGCGAATGTCGAAGAACGGT
CACAAGGTGTCACTGCTGCACTCAGATCTGTCTGTTGACGAGCGAGACCGACTCATGGAT
GACTTCCGATTTGGTCGATCTAAGGTTCTCATTTCTACCAACGTTATTGCCCGAGGTATC
GATATCGCCACCGTCTCCATGGTCGTTAACTACGATCTCCCCACGGACAAGAACGGTAAG
CCCGATCCCGAGACTTACCTACACCGAATCGGACGAACCGGACGCTTCGGTCGATCCGGA
GTGTCCATCTCCTTTGTGCACGACGAGGCCAGCTTCGAGGTTCTCGACTCCATCCAGCAG
TCTCTCGGTATGACCCTTACCCAGGTTCCCACCGACGACATTGATGAAGTTGAGGAGATT
ATCAAGAAGGCCATCAAGGGTAAATAGACGTTAACGGTAATATATGGTGGTATTCTTGGA
GCCAGAGAGTATGTAGTGCAAGACACTGTAGTACGAGTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31427g_CDS-001

Protein length: 489 aa.
Product: DEAD-domain-containing protein, putative

>YALI0E31427g_CDS-001 MSDQVSDMLEKLELQKEKNQAAATEAKVEEVKEDDKKDVKEELNEDDKKVAKEDDKKEDA
KEESKEDAEENNLIQTEYEVRVKLADLQADPNSPLYSAKRFEDLGLDENLLKGLYAMKFN
KPSKIQEKALPLLLSDPPHNMIGQSQSGTGKTGAFSLTMLSRVDPNLKAVQCICLAPSRE
LARQTLDVVDEMKKFTDITTHLIVPESTERGQKVTSQILVGTPGSVAGLLQKKQIDAKHV
KVFVLDEADNMVDSSMGSTCARIKKYLPSSTQVVLFSATFPESVLDLAGKMCPNPNEIRL
KANELNVDAITQLYMDCEDGEEKFKMLEELYSMLTIASSVIFVAQRSTANALYQRMSKNG
HKVSLLHSDLSVDERDRLMDDFRFGRSKVLISTNVIARGIDIATVSMVVNYDLPTDKNGK
PDPETYLHRIGRTGRFGRSGVSISFVHDEASFEVLDSIQQSLGMTLTQVPTDDIDEVEEI
IKKAIKGK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG