YALI0E30547g

Overview

Description similar to uniprot|P53127 Saccharomyces cerevisiae YGL131C DNA binding protein with similarity to the S. pombe Snt2 protein
Locus type CDS
Locus tag YALI0E30547g

Location

Species Yarrowia lipolytica Positions 3593665..3598490
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 4826 (nuc.)
Previous locus YALI0E30525g Next locus YALI0E30569g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E30547g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E30547gYALI0E30547g_mRNA-001YALI0E30547g_CDS-001

Nucleotide sequence

 

>YALI0E30547g
AGTGAGTATTTGCCGGCTCGAAGGGGCCGTGCGGAAGCTGGAAATTCCAGAGATCAATCA
TCTGGCGGCTTCGGGGCTCTCGATTGGCCCAGGATGATCCACGCCAACATGGAGAGAATC
CCCCAGAAGGGGGTGGCCAACAGGAGGGTGTTACGGGAGGAGAGCAAGACAAAACCAGAC
ACCAATGATTGGGGGGAACACACGGAGCAAACGGAACTGCGTCACAGGTATCACTCGGTA
CACCTACTCATATTTATGTCGCCATCATCACCATCTGGGAGGACTGAGAGGCTGTGTAAC
CTCCACGACTACGAATGCGATACTATGCCACATCAAGAGGGAGCGATTTATGCCGGGTCA
AGTGGTTGTGCCGCCGGAACTCCCTATTAAATGATCCATACGTCGCCCAGCTCTTTTTGC
CATCTACAGCCCTTGTGTGTGGTGTTCGTTCGAGGTGAACATCTTGTCGTTTTCCTCCAA
ATTATCACCAAGACCCTAAATGGTTGATGACACCTGATCTATATGGTTCAAAGCATGGGA
CACTGGTGTCCCTGTGTTCGGCAACAAGCGCGTGTTGGGGGAGCCCATGTTCTAGGCCGT
CTCGCAAGAAGTTTTTTCCGCTCCTTTTCTGCGGGTACCCTGTCGAGTGATCCTGTCTTC
TGAGGCTAGACGTTGTGTTTGCGCCCCATTCGGCCAGAAAACTACCGTCTCTTTTCTTGC
TCTGTTAGAGGGCCAGTTTCGGACCGCTCCGCGCACCTCATTTTCCATGCACGTCCTACC
TCCCAATATTGACAAAACCATTATTATGTCTGGCTCACATGCATGATATGACAAACCATA
AACTAACACAGTGTCGCGAAGACGAACCACAAAGGTGGTAAATTACTCGGAAAAGATATA
TGATGAGAGTTTAGAGGAGGATTTCGAGGGGGAGGTGGAAGAGGAAACCAAGCCCACCCC
GCAGTCTCAAACACCATCATCTGCATCATCCACACAATCGCCGGCCAAGATGCCGAAAGG
AGAAGGTAAAAAGACCTCCAAACAGACCACCCCAGACGTTGCTACAAATGGGGTAGGGCA
TGATATCGTCCCCTCCAACTGGCAGCCTCGATCGCATCCCAGTGACGCCCTCACAGGTGT
GCTGGATCTGGAGGACGCGTACATCAAGGGAGGAAAACTGCATCTGACCTCGGGAACCAC
ATATGCTCCAGGCGACCATTGTTACATTGTTTCTGAGCCTCCTGGTGAGCCTTACTACAT
TGGTCGTATTATGGACTTTGTCATCAACGAGGAGAACCCTACAGTCACAGATGGCAACAC
CGACAAGCATTGGAGCACCTTGAATCCCCGACAAAAATACCCTGCATCACAATTTCTGTT
CCAGGTCAACTGGTTCTACCGACCCAAGGATATTTCCAAGCATGTTGCTGATAGTCGTCT
TCTATACGCCACCATGCACTCTGACATTTGTTCTCTACAGAGCATGCGGGGCAAGTGCAT
TGTCACCCACAGAACAGACATTATCGACATTGAGGATTACCGTACAAAGCCCAACCATTT
CTACTTCACACAATTTTACGACCGGTACATTCTGCGGTTCTACGAAATTGTGCCCACCCA
TACCATGGTCAACATCCCCAAGGAAGTATCCCAGGTCCTATGCGAGCGGTTCAAATACGC
CATTATGGAGATCAACCGAAAGCAGGAGTTTTGTGAGCCTCCTAAGGAGTGTGTTACCTG
CTCCAACTGGAGTTCGCCGGACGACTCTGTGGAGTGTGCTCATTGCAGAACCAACTTCCA
CATGATGTGTGTTACTCCGCCGTTGTTCAAGAAGCCCACCCGAGGTTTTGGATGGTCGTG
TGCTGCCTGCAATCGAAAAGTAGAGAAGCGTCTCAAAGAGGCCAAGGGCGAGTTTTTCGA
CGATGTCATTCCTGAAGTTACAGAGGTTGCAGCGGAGGTCATGCCTGAAACGAGCCCATC
AATGTCTCGTTCCACATCTCCCGATAAGCACAGAAGCAGGTATGAAGAGCTGGCTGAGGC
GTTCGGAAAGGACAATTCATTATCGGATGAGCAGAAGCATCAACTTCAGCTGTGGCCGTT
CCGATATCTCGGTGTCTATGCCAAAATTGAGGACGTTCTCGATGTTGATGATCGAATCTA
TCCTCGAGCCGTGTCTCGTCTCGGTCCCAAGCATCAGGCTGTAGTCGATAACTGGCCTGG
CCAGCCAGTGGAGTACGTTGGTCCATTCCGAGATGCTCCTGTCAAGAAGCGTGGTAAGAA
AAAGAATGATGATGGCTTCAACTTTGACCCTGAGAAGCCCTGGATTCAAGATCGGCCAAT
CGGATACATTGACCGAGGAGGGGACGATACCGTCAAACTTATGTGGGACTGTGAGGCCGG
TGCTCGGGCTGAAGAGAAGAATCCAATGCTCATTGAGAACTTCCTTGAGTCGTGTGCCCC
TCACGCGAAGAAGCTGGGTGTTCGACATGACACACCAAACTACTTTGACTTGTGTCTCAA
GGCCCTGATGGATGCTGACTTTGACCCTGCTGTTGCTCTTAAGGCAGTCAACAAGCTTAC
TGTCAAGAGCATTGATGAGCCCGTGTTCAGCGCTGAAGACAAGCGTCGGTTTGAAGAGGG
AGTGTCAAAGTACGGAAGTGAGTTACATCCTGTCACGCTGGAGATTGGTACACAGACCCC
TGGCCACGTTGTTCGGTACTACTACAACTGGAAGAAGTCTCCCAGTGGTCGTAAGATCTG
GGGCAATTATCCGGGCCGAAAGCACAAGAAGGGAGGGGCTGCAGAGGAGGAGAAAAAGAA
GAAGCCCAAGGTTGATATCGGCGACGACAGTGATGGAAGTGCATATGATGTCAACAAGGC
TGTTCGTCAGAAGAAGTCATTTGAGTGCAAGCATTGTCTCACCACCAATTCTCCTTGTTG
GAAACGTGCCCCTGGAGGTGGAGATGACGAAGGCAATCAGGTTCAGGCTTTGTGTCAGCG
ATGTGCCAGACTGTGGAGACGTTATGCTGTTATCTGGGAGGATTCTGATGATATCAACCG
CAAGCTCATTGCTCGAGGAGGCAAGTTGTGGGCAAAGAAGGTTGAGGCTGAGCTTCTGGA
CGACACACGAGGCATTTTCGAGGAGCGTGCACGAAGCTGCTCCAAGAAGGGTGGCCGCAA
GAAGTCCACTGGAACTGCAGCTACGTCTGCTACTCCTGTGCCTATTCCTCACATTCCCAC
TGCCCGTGAGGCCGCTGCTGCTGCTGCACGAGAAGAGAAGCAGCGCATGGAAGAGGAGCG
CAAGGCCGAAGAGGAGCGAGAACGCAAGGCACGAGCCGAGGCCCGGGAACGAGAAAAGGA
TCGTAAAGAGAAGGAGGATCGCGAGCGACGAGACAAAGAACGTAAGGAAAAGGAAAAGCG
AGACAAGGAGCGAAAGGAACGGGAAAAGAAAGCCAAAGATGAAAAGATCAAGAAGGAGGA
TCGAGAGTCGAAGAAGCGATCTTGGGAGACCGAGGAGCAGGCCAGAAAGAAGGTCAAGCC
TGCCTCTGCCTCCACGACTCTGAGTGCAAACCTGCCCACCGAGTCTTACAGACAGAGGGA
ACGCCCTGGCCATGTGTTTAAGGGTGACAAGACCCCTCCTCCTCCCCGAAAGTTTCCTTT
TCGAAAAGTTCTGAAGGATGCATGCAACGTCTGTGGTGTTTCCAATGAGCGTATGATTCT
CAGTTGCTCGGGGTGTCAGATGTGTGTTCATCGAGAGTGTTATGGTGTTACTGCCGAGGA
GCCCCAGTTGATGTCTGGAGGATGGTACTGCGATCTATGTACCAATGATGCTAAGCCTAA
TGTCAACACGCACTACCAGTGTGTTCTGTGTCCTATCAGGGACAATGACAACGAGCCCAA
TGGTAAGCAGTACCCTCCCGACCCTCTCAAGCGAACTGAGCACAACCACTGGGCTCATAT
CCGATGCAGTGTTTGGAACAACAAACTCATTTTTGGTACCCCCAACCTGGAGCCTGTTCT
TGGTCTTGCTCAAGATGTGCGACACAGTGGAACTGGCATCTGTTTCATCTGTAAGACGGG
GGTGGGTGTCTGCATCAACTGCCGATGTTGCGGTATGGAGTACCATGCAGGATGTGCTCA
CAGACACAACTATGTGTTTGGATTCGAGCTGCTTCCTGAGAGTGAGGTTCGACCCGGTTA
CCCCCTGGTGGAGTTCAATGGTAAAAGAGGTGGTATGTGTGCTACTACCTATTGTTATTG
GCATGCTCCTCAGTCGGTGATTCTGCCTGCTGAAACGGATCAGAAGCTTGGGAAGACAGC
ATTGCAACTCTTCATCGAGAAGTACAAGATTGACCCTCAGTGGAAAAAGTGTGCCAGCGA
TGCCTCACTTGCAATGCAGCTAATCTACGACGTTAACCACGACCCTCGACCTCCCCCAGA
CGTACCGGAGCTCAACAAAAAGTGCCACAAGTGCAGCGTTGGGGTTTCGCCTTTCTGGCG
AAAGACCGATGAAGGTGACATCTGTCATAGCTGTTTCCATGGCAACAAAATTGAGCATCA
GGATCTCAACATTGGTCTGCCTGAGTTTTCCCAGCCCATGCGCAAGTTGATGCATTTAGA
TATTCTGTATCGAACCGAGCAGTCGTACAGGAATGCCCGAGATACTCAACATCTCAATCA
TGCAACTGCCCCACTCCCCCTTCCCCAGATTCATCCAGCTCTTGAGTCCTACGGCGGCGA
TCCCATGAGCATCAGAGCGCGAGCTGAAACCTCCTCTATTTAGGAGATTTACATAGAACA
TAAATTATTACTGACTTAATCTTCCC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E30547g_CDS-001

Protein length: 1311 aa.
Product: DNA binding protein, putative

>YALI0E30547g_CDS-001 MSRRRTTKVVNYSEKIYDESLEEDFEGEVEEETKPTPQSQTPSSASSTQSPAKMPKGEGK
KTSKQTTPDVATNGVGHDIVPSNWQPRSHPSDALTGVLDLEDAYIKGGKLHLTSGTTYAP
GDHCYIVSEPPGEPYYIGRIMDFVINEENPTVTDGNTDKHWSTLNPRQKYPASQFLFQVN
WFYRPKDISKHVADSRLLYATMHSDICSLQSMRGKCIVTHRTDIIDIEDYRTKPNHFYFT
QFYDRYILRFYEIVPTHTMVNIPKEVSQVLCERFKYAIMEINRKQEFCEPPKECVTCSNW
SSPDDSVECAHCRTNFHMMCVTPPLFKKPTRGFGWSCAACNRKVEKRLKEAKGEFFDDVI
PEVTEVAAEVMPETSPSMSRSTSPDKHRSRYEELAEAFGKDNSLSDEQKHQLQLWPFRYL
GVYAKIEDVLDVDDRIYPRAVSRLGPKHQAVVDNWPGQPVEYVGPFRDAPVKKRGKKKND
DGFNFDPEKPWIQDRPIGYIDRGGDDTVKLMWDCEAGARAEEKNPMLIENFLESCAPHAK
KLGVRHDTPNYFDLCLKALMDADFDPAVALKAVNKLTVKSIDEPVFSAEDKRRFEEGVSK
YGSELHPVTLEIGTQTPGHVVRYYYNWKKSPSGRKIWGNYPGRKHKKGGAAEEEKKKKPK
VDIGDDSDGSAYDVNKAVRQKKSFECKHCLTTNSPCWKRAPGGGDDEGNQVQALCQRCAR
LWRRYAVIWEDSDDINRKLIARGGKLWAKKVEAELLDDTRGIFEERARSCSKKGGRKKST
GTAATSATPVPIPHIPTAREAAAAAAREEKQRMEEERKAEEERERKARAEAREREKDRKE
KEDRERRDKERKEKEKRDKERKEREKKAKDEKIKKEDRESKKRSWETEEQARKKVKPASA
STTLSANLPTESYRQRERPGHVFKGDKTPPPPRKFPFRKVLKDACNVCGVSNERMILSCS
GCQMCVHRECYGVTAEEPQLMSGGWYCDLCTNDAKPNVNTHYQCVLCPIRDNDNEPNGKQ
YPPDPLKRTEHNHWAHIRCSVWNNKLIFGTPNLEPVLGLAQDVRHSGTGICFICKTGVGV
CINCRCCGMEYHAGCAHRHNYVFGFELLPESEVRPGYPLVEFNGKRGGMCATTYCYWHAP
QSVILPAETDQKLGKTALQLFIEKYKIDPQWKKCASDASLAMQLIYDVNHDPRPPPDVPE
LNKKCHKCSVGVSPFWRKTDEGDICHSCFHGNKIEHQDLNIGLPEFSQPMRKLMHLDILY
RTEQSYRNARDTQHLNHATAPLPLPQIHPALESYGGDPMSIRARAETSSI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG