YALI0E30569g

Overview

Description similar to uniprot|O73931 Salmo salar U2 snRNP- specific A protein
Locus type CDS
Locus tag YALI0E30569g

Location

Species Yarrowia lipolytica Positions 3598519..3599286
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 768 (nuc.)
Previous locus YALI0E30547g Next locus YALI0E30591g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E30569g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E30569gYALI0E30569g_mRNA-001YALI0E30569g_CDS-001

Nucleotide sequence

 

>YALI0E30569g
ATGAACTTTTGGTGGTTAAAGTTCGACGATGCAAGCACTGAAAGTCTTCGAAACAACATC
TTCACAAACAACAGCATTACGAAAAACATGAGACTCAACGCAGACACCATTCTCAACGCG
CAGTCATACATCAACCCCATTGGTGACCGAGAGTTGAATCTGCGTGGGCTGCAGATTCCG
GTTATAGAGAACCTCGGAGTCACCGAAGATCATTACACGTCCTTGGACCTCAGTGACAAC
GAGATCCGTGTCATGGGAGGCTTTCCTCGACTCGAAACCCTTCGGACACTGCTGCTGAGC
AAAAATCGCATCACACAGATCAACGATGTCAAAAACATCGCCAAGCTGGAGACTTTGGTT
CTGACACAGAATGGAATCGCGACTCTGGGTGCATTAGAAAGCCTGAAGAGCCTCGTCAAC
CTCACAGCTATCACTCTTGATGGCAATCCCGTGCAGCACGTACCCCGCTACAGAAGCTAC
ATGATTTCTATTCTGCCTTCTCTTCGCATGCTCGATTTCCAGCGAGTAACACAAAAGGAA
CGTGACGAGGCTGAAGCCATGGAGTTCGACGTGGTGCCTGTGACGGAAACCGACAACCTC
AGCGCTGTGGACAAGGCTGAGTTGAGAGAGCGACTCAAGAACGCTACCACCATCCAAGAG
ATCGAGGAGATCGAGGCCATGCTGAAGGTCTAGACAAGATCCAGCCACTGCATCATATTT
AACACCACTACTATTAGCATTGTAATATATTCACATTTGTACAATTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E30569g_CDS-001

Protein length: 231 aa.
Product: U2 snRNP-specific A protein, putative

>YALI0E30569g_CDS-001 MNFWWLKFDDASTESLRNNIFTNNSITKNMRLNADTILNAQSYINPIGDRELNLRGLQIP
VIENLGVTEDHYTSLDLSDNEIRVMGGFPRLETLRTLLLSKNRITQINDVKNIAKLETLV
LTQNGIATLGALESLKSLVNLTAITLDGNPVQHVPRYRSYMISILPSLRMLDFQRVTQKE
RDEAEAMEFDVVPVTETDNLSAVDKAELRERLKNATTIQEIEEIEAMLKV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG