YALI0E20427g

Overview

Description similar to uniprot|C5FMY7 Arthroderma otae quinate permease
Locus type CDS
Locus tag YALI0E20427g

Location

Species Yarrowia lipolytica Positions 2419699..2421442
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1744 (nuc.)
Previous locus YALI0E20405g Next locus YALI0E20449g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20427g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20427gYALI0E20427g_mRNA-001YALI0E20427g_CDS-001

Nucleotide sequence

 

>YALI0E20427g
ATGTCCGGGCAGACATATATAGAGGGATGGCCTGGAGTTGAGCCAGTCCTTTTTCTTCTT
TCTCTATCGACTCTGTCACTCTCTCCTCCAGCCATGTTTTGGATTTCAATGAAAAACGAG
CCCAAGCAGGTGCTCAACAGAACCCTGTGGTTCGCCATCTTCGTCTTTGGTCTTCTGGGA
ACCTCCCGAGGTCTCGACGAGGGAAACATTTCCGGTACCGTTGCCCAGCCATCTTTCATC
TCCAAATTCAAGCTCCATGACCCCAGTCTATCCAAGGACGCCCAGGCTAACTTGCTGTCC
AACATCACCAGTATGGTCCAGATTGGCTCTGTTGCCGGAGCTCTTATCGCTATGCTCATT
GTCGATCGTATCGGCCGACTGTGGGCTCTCAGAGAAATGCTTGTCATCTGGATTGTCGGT
GTCATCGTCCAGATTACCTCCAACAATGTCGGTCAACTGTACGCTGGTCGTTTTGTTGCC
GGCATGGGTATCGGTCAGTCTGTTGTCATTGGTCCCACCTACCTGGCTGAGATTGCTCCT
CCTCATGTCAGAGGTCTGGCAACCTGTGTCTTCTCTGGTTCCGTCTATCTGGGAGTCATG
CTGTCGTACTTTGCCAACTATGGTACCACTCTGCACATCTCAAACACCTCCCGGAACCAG
TGGGTCATCCCCACCACTCTGCAGATCATCTTCTCTGGTATCATGCTGATTGGCTCTATC
TTTGTCCACGAGTCTCCTCGATGGCTCATGAAGATCGGCAAGGAAGAAGAGGCCGTTGAA
ACTCTGTGCAAGATCCGTAAGCTTCCCGCCGACGATCTCTACGTCCAGGGCGAGATTCTC
ATGGTGCGAGAGCAGATTGAGCGAGAAAAGCAGGCTATGACCGGCGCCTCATACTGGTCG
CTGTTCAAGGAGCTGCTGGCTACCCCTGCCAACCGGTACCGACTCTTCCTTGGTCTCATG
ATCCAGATTCTGGGCCAGTGGTCCGGAGCCAATGCCATTACCATCTATGCTCCTTCCTTC
TTCCAGATGATCGGTGTCAGCGGCCAGCAGCAGAAGATGTTCGCCACGGCCATTCTTGGA
GTCGTCAAGTTCGCCGCCTCCATTATTTGCGCCGTCTTCCTAATCGATACCATTGGCAGA
CGACGATCTCTCTACTCGGGTATCACTCTGCAGTTCATCTCCATTCTGTATGTGGCCATC
TACCTGGCTGTGGTGCCCAACAACGACCCCTCGCGGATCAAGTCTGCTGCCGAGCGACAT
GCCGGAGTCGGCGCCATTGCCTTCATCTACCTCTCGGGTGTGGGCTGGGCTCTCGGTTGG
AACTCCATCCAGTACCTCATCAACGCCGAGATCTACACTGTTCGGCACAGATCTCTGGCG
TCCGGTCTCATCATGACGGTCCATTTCGCCAACCAGTACGGCAACTCCAAGGCTCTGCCT
TCCATGCGACTGGGAATGACCGACACTGGAGCCATGTTCTTCTTCTCCGGGATCATTCTC
GTCGGTCTGGTGTGGTCCTGGTTCTTCCTGCCCGAGGTCTCGGGCCGGTCTCTCGAGTCC
ATCGACGAAATGTTCTCGCTGCCTTGGTATCTCATTGGAAGACGGGGCCACCAGATGGTG
CCCGAGACTTCAGCTGCTGTGCAGATTGCCGCCGACGAGGATGAGAAGAAGGGCGGGGTG
GTCCATGTGGAGAACTGCTAGAAGCGTCGCTAAGTTATATATATTTATCATGTTTGCACT
TCCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20427g_CDS-001

Protein length: 567 aa.
Product: Quinate permease, putative

>YALI0E20427g_CDS-001 MSGQTYIEGWPGVEPVLFLLSLSTLSLSPPAMFWISMKNEPKQVLNRTLWFAIFVFGLLG
TSRGLDEGNISGTVAQPSFISKFKLHDPSLSKDAQANLLSNITSMVQIGSVAGALIAMLI
VDRIGRLWALREMLVIWIVGVIVQITSNNVGQLYAGRFVAGMGIGQSVVIGPTYLAEIAP
PHVRGLATCVFSGSVYLGVMLSYFANYGTTLHISNTSRNQWVIPTTLQIIFSGIMLIGSI
FVHESPRWLMKIGKEEEAVETLCKIRKLPADDLYVQGEILMVREQIEREKQAMTGASYWS
LFKELLATPANRYRLFLGLMIQILGQWSGANAITIYAPSFFQMIGVSGQQQKMFATAILG
VVKFAASIICAVFLIDTIGRRRSLYSGITLQFISILYVAIYLAVVPNNDPSRIKSAAERH
AGVGAIAFIYLSGVGWALGWNSIQYLINAEIYTVRHRSLASGLIMTVHFANQYGNSKALP
SMRLGMTDTGAMFFFSGIILVGLVWSWFFLPEVSGRSLESIDEMFSLPWYLIGRRGHQMV
PETSAAVQIAADEDEKKGGVVHVENC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG