YALI0E19558g

Overview

Description weakly similar to uniprot|P25639 Saccharomyces cerevisiae YCR061w
Locus type CDS
Locus tag YALI0E19558g

Location

Species Yarrowia lipolytica Positions 2338040..2340478
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2439 (nuc.)
Previous locus YALI0E19536g Next locus YALI0E19580g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E19558g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E19558gYALI0E19558g_mRNA-001YALI0E19558g_CDS-001

Nucleotide sequence

 

>YALI0E19558g
ATGAAAGTGTCCATTCTCCTAGCAGCGGCTACTGCAGCCTCCGCAATTGCTCTCCCACAA
CTCCACAGACGTCACGAGGGACATGATGAGACAGAAGCCACGGGCATCACCAACACACCC
CACAGTAACGACAAGACAAACATCAACGATATCAACGATAACAACGATGCAACCTCGCCA
TCAGCACATAGCCATAGCAATACCCACAGCGGCAACTCGACACACGACAATGAAGACATG
ATGGAACCCAACCCAGCATCAATGAACGGAGGCCACCACTCCCACGGCCTGCCCATTCTG
GCGCACCCCGAAAAACTCGAGCCCCAGCAGCTGGCGTACTGGACCGCCTACGACCCCACC
AACTTCTTCAACACAGAAACCCCCGGCCAGAGCCTTCTCACCTGGCACATCCTCATGGTG
GCCACCGCTTGGATCGGCGTCTATCCCATCGCGGTGATGTTGTCGTCGGCCAAATCGGGC
CTGTACCTCCCGGTCCAGACCGCCCAAGTGGTCATGGTGGCGCTCGGAGCCATTTTCCTA
GGCATGTACGGATCGTCCCCCGAGGTGGAAAAGATGTACCCCGGCGCCATCTACGGAAAG
TTTACCGTGCTCGTTCTCATCCTGTCGCTGGTGCACTACCTGGCGGCCCTGCTGACCTCG
CTCGCCTACCGAGACACCACACCCAACGATAGCGACCCCCGCCAGCTGGCCGAGGCGTTC
CAGCTGCAGCCCTACCACCGGGTCAGCGACTCCGACTCAGACCACACCCTCAATGGCACT
CCCTCCGCGACCCCCTCCGTTCCCCAGCCCTCCAAGTTCCGAATCTCCGAAGACGCCGAG
GACGATACCCCCATGTCTCCCTGCCAGTACTACGGAGACGACGAGTGTGGAGGAGCCGAG
GCTGCTTCTTCGTCCTCGATGCGGCCCCAGCCCTTTGAGCAGAAGATGGAGGACAAGTGG
GTCGCACGGCTGATGGCCAACTCCCATGTCAGCAGCACCGTCGACCGGTTCGGAGCCCTG
GCCAACTTTGTGCACACCTACCTCCAGGGCATTATGCTGCTCGTGGCGTTTGCATACGTG
ATCTGCGGCGTGGTGACTGGCTGTCGCCTAGGCATGGGCCACAATGTGTTCAACATTCTC
GCTCACTTTATCAAGGGCGGTGTCTTCACCGTGCTCGGTCTCTTCACCTTTGCTCGTTAC
GTCGGCGTCTTCACCGACAAGGGCTGGGCCTGGAACCTGAACCAGGAGCAGGTCAACAGC
GTCAAGATGCTGCATTCTCGAAGCAGGGCCAACTCGCGCGGTTCTCGACGACGAGCGCGA
TCTTCTCCCCCCGCTCCCACCAAGATGACTGCTCTGTCTGTGGCTCGAACCGCAGTTTCC
AAGGTGTTTGGCGTGCTGGCCTTCCTCAAGCCCCAGTCCTTCACGTTTGAGTTTGTCGAG
TCCGCGCTCATTCTCATTTACGGCGTGCCCAACATCTTCATGGAGCACCTCGCTTCTAAG
GACGGTCACTGGACGCCCGCAGACCTGCAGCATGCCTCCATTGCCTTCATGTTCATTGGC
GGCGGTCTGTCTGGCGTGCTGCTCGAGTCTGCCCTGGTGCGAAAGCTTCTGAGCTCCAAG
ACGTACCCCATGTCCTTTAACCCCTTCCCCGCGCTCACCATTTTCTGGACCGGCATTCTC
ATGTCCCAGCACGCCCAGGCGCTGCCTCTGTCCACTGCTATCCACACCCAGTGGGGCTAC
CTGCTGGCCATTGGCGCCGTCTTCCGAGGAATCACCTACTTGCAGTACTTTATCGTGTAC
TCGCAGGCTCTGGCTCGACTTGACGGGGGTGCTGAGATGAATGTGGACCAGCTGACTCTG
CCCAGCCGTCCCTTCACGGAAATTGTGGCATCCTTCTGTCTCATTTCTGGTGGTCTGGTA
TTCATGCAGAGCAACCGAGAGACGGTCGAGGCGTTTGTTTACCGGGGCATTGACTCCATG
TTCACTCTCAACGTGACTGTGGGCGTCACCTCGTTCATCATGGCATGGGAGCTTGTGGTT
CTTGCCATCAAGGGCTGGGCTTCTCGACGGAAGCGAGTTTAAGGATTACGAGTCGGGAAT
CGCGAGTGAGGATTTCTGCCATTGAGGTCAGCATTGTTCTGGCTGTGGAATAATTGGGGG
GGGGGAGGGGAGAGAAGGGCGGGATTGGTCGCTCGGTGTCTCTCTCCCATGGCTTTGGTT
GGCCCTCAGGAAATACCCGAGACGACGAGGAGGGGCTTTTATTGCTGAAACCCGACGATG
ACAGGGACGCAGACGTTTCTAGTCGTCCTAATAACACCACCACCTATAGGTTCTTAGCAT
TCTTTACTTTTTTATCTGCATTTGCTAATTTTGGTCTCGGTTCTGAAATGAATTGAGCAC
TTGATGTAATATAACTATTGATATTGACAATACCGACGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E19558g_CDS-001

Protein length: 694 aa.
Product: Conserved hypothetical protein

>YALI0E19558g_CDS-001 MKVSILLAAATAASAIALPQLHRRHEGHDETEATGITNTPHSNDKTNINDINDNNDATSP
SAHSHSNTHSGNSTHDNEDMMEPNPASMNGGHHSHGLPILAHPEKLEPQQLAYWTAYDPT
NFFNTETPGQSLLTWHILMVATAWIGVYPIAVMLSSAKSGLYLPVQTAQVVMVALGAIFL
GMYGSSPEVEKMYPGAIYGKFTVLVLILSLVHYLAALLTSLAYRDTTPNDSDPRQLAEAF
QLQPYHRVSDSDSDHTLNGTPSATPSVPQPSKFRISEDAEDDTPMSPCQYYGDDECGGAE
AASSSSMRPQPFEQKMEDKWVARLMANSHVSSTVDRFGALANFVHTYLQGIMLLVAFAYV
ICGVVTGCRLGMGHNVFNILAHFIKGGVFTVLGLFTFARYVGVFTDKGWAWNLNQEQVNS
VKMLHSRSRANSRGSRRRARSSPPAPTKMTALSVARTAVSKVFGVLAFLKPQSFTFEFVE
SALILIYGVPNIFMEHLASKDGHWTPADLQHASIAFMFIGGGLSGVLLESALVRKLLSSK
TYPMSFNPFPALTIFWTGILMSQHAQALPLSTAIHTQWGYLLAIGAVFRGITYLQYFIVY
SQALARLDGGAEMNVDQLTLPSRPFTEIVASFCLISGGLVFMQSNRETVEAFVYRGIDSM
FTLNVTVGVTSFIMAWELVVLAIKGWASRRKRV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG