YALI0E19580g

Overview

Description some similarities with uniprot|Q6C512 Yarrowia lipolytica YALI0E21956g
Locus type CDS
Locus tag YALI0E19580g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 2341386..2341775
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 390 (nuc.)
Previous locus YALI0E19558g Next locus YALI0E19613g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E19580g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E19580gYALI0E19580g_mRNA-001YALI0E19580g_CDS-001

Nucleotide sequence

 

>YALI0E19580g
GCCATCACACCCATTCTGTACGGCCAATTGCTGGAAAATGTGTACGACGAAGTGAGAGAT
ACTCCTCTTCCAAGCTACGAACATACAAGACTGCCGTCTGCAGGGGCTGGAGAGTCTGTC
GCACTCTGTGCCTGGCCATGTCATCAAGCTGGCTAACCTGACACGACGCCCAAAGCAGGT
GCAGACGTGTCCAATTCTAGAGCTCATGCGAGACCGGAATCACATACGCCATTGCTCTCT
ACCACTATGGCCAGCACAACAACTCTATGGCGGTGTGCAGCTGTGACAAGCTGTGGAGAG
TGGGCTTCAACAGTGGAAAGCTGGAGGGACCTCGAGTACCCCACACTTTGATAATGCCCG
GCTCCATTCATTCTCATCTCCATCGTTGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E19580g_CDS-001

Protein length: 120 aa.
Product: Pseudogene, hypothetical protein conserved in the Yarrowia clade

>YALI0E19580g_CDS-001 AITPILYGQLLENVYDEVRDTPLPSYEHTRLRLQGLESLSHSVPGHVIKLANLTRRPKQV
QTGITYAIALYHYGQHNNSMAVCSCDKLWRVGFNSGKLEGPRVPHTLIMPAPFILISIVD


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG