YALI0E19338g

Overview

Description similar to uniprot|Q12691 Saccharomyces cerevisiae YDR038c ENA5 P-type ATPase involved in Na+ efflux
Locus type CDS
Locus tag YALI0E19338g

Location

Species Yarrowia lipolytica Positions 2301251..2304415
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 3165 (nuc.)
Previous locus YALI0E19316r Next locus YALI0E19360g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E19338g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E19338gYALI0E19338g_mRNA-001YALI0E19338g_CDS-001

Nucleotide sequence

 

>YALI0E19338g
ATGACTGATAACATTTCTCAATCCCCCCCAACTGCCTTCCATACTCTGGACGTGCCGCAG
GTGCTGAGCCACTTTGCCTGTGATGAGGAGCAGGGTCTTTCGTCGTCGCAGGTGGCCACT
CAGCGCCAGCAGCATGGTCCCAATGCGCTGGACACCGGAGACGCCGTGTCGCTGCTCCAG
GTGATCATTGGCCAGTCCTGCAACGCCATGATCATGGTCATGATCATTGCAATGTGCGTG
GCGTTTGGAATTCGAGACTGGATTTCCGCCGGCGTCATTGCCGGTGTGGTCGCCATCAAC
ATTGTGGTGGGCGTGATCCAGCAGTACAACGCCGAAAAGACTCTTGACTCGCTCAAAAAC
CTCTCGTCGCCCTCCGCCAACGTGATTCGAGATGGCAAGGAGCTCGTGGTCGAGTCCGAA
GAGGTTGTGCCTGGAGACATTGTGACCGTCAAGGTCGGAGATACCATTCCCGCTGATTTC
CGACTCATTTCCGGCGTCAACTTTGAGACCGACGAGGCGCTGCTCACTGGAGAGTCGCTG
CCCGTTGTCAAGGACCCCGCCACTCTCGACGACCCCGTTTGTCCCGTTGGAGACCGAGTC
AACATGGCCTTTTCTTCCTCTGTTGTCTCCAAGGGCCGAGCCAAGGGTATTGTCACCTCC
ACCGGTATGAACACAGAGATTGGAACCATTGCCAAATCCTTGCAGGGCGAGAAGACCAGC
TTCCGAAAGCCCAAGGACGACTCCTTTGGAGCCAAAATGTCCGCCTTCTTTGGCACGTGC
GGAGACTACATCCAGACCTTCCTGGGTACCAACACCGGTACGCCTCTGCAGATCAGACTG
GCCAAGCTCGCCGTGCTCATTTTCGTTATTGCCGTCGTCATGGCCATTGTCGTCATGGCT
GCTCAGAAGTTTGATGTGACACGAGAGGTCGCCATCTACGCCGTTGCTGTCGCTGTGTCC
ATGATTCCCGCATCCCTTGTTGTCGTGCTCACCATCACCATGGCCGTGGGCACCAAGATT
ATGGTCAAGCGAAACGTCATTGTGCGAAAACTCGACTCGCTCGAGGCTCTCGGTGCCGTC
AACGACATTTGCTCCGACAAGACCGGCACCCTGACCCAAGGAAAGATGGTGGCCCGAAAG
TGCTGGGTGCCCTCGCTCGGTACTTTGTCTGTGCAGAACATTACTCATCCCTACAACCCC
ACCGAGGGCTCGGTGGAGCTGCGACGAGTGGACCCTGTTGCCGACGCTCGAATGACCGTC
AAGGCCAACAAGAAGATTGACCAGGACCTGTCTCTGTCTCCCTGTGTGTCACGGTACTCC
AACAAGTCCGTGTCCATCAAGGCCATCAACGTGAACGAGAGCGAGGACTCTTCCTCAGAT
GAGGACCCGGAGATCATCTCCCACACCCACGTTCCTGCTTCTCTGGCCCCCTGGTTGTAC
ACTGCCACCCTGGCCAACATTGCTGAGGTCAAGAAGGACGAGACTGATGGTTGGACCGCG
TCTGGAGACCCTACTGAGATTGCCATCCAGGTTTTCACTTCCCGACTGGGCTTTGGACGA
GATACAATTGGATATACCCACATTGCCGAGCACCCCTTTGACTCGACCATCAAGCGAATG
TCTGCCGTCTACACTGACGGGGAGAAGGGCCAGTCCACTGTCTACACCAAGGGCGCTGTT
GAGCGTGTTCTCGAGTGCTGCTCCACCTGGATCAACGCCAGTGGAACCACTGAGGATTTC
ACCCCCGAAGTTGACCAGATGATTCAGCAGCAGATGGACGCCTTTGCCAAGCAGGGTCTC
CGAGTGCTTGCGTTTGCTACCAGACCTGTTGACCTCGAGACTGAGGACGCCAAGGACCGA
GTCAAGATGGAGCAGGGTCTCACCTTCCTGGGTCTCGTTGGAATCTATGATCCTCCCCGT
GTTGAGTCTGCTGGTGCCGTGGCCCAATGCCATCGGGCCGGAATCAATGTCCACATGCTT
ACTGGAGATCACCCTGGAACCGCACGAGCCATTGCCGAGGAGGTTGGAATCCTACCTCGA
GATATCGCCGACTACCCCGAGTCCGTGGTTTCCGCCATGGTTATGACCGCCATGCAGTTT
GACGCCCTGACCGACGAGCAGATCGACGCTCTCCCTGTTCTTCCCCTTGTTATTGCCCGA
TGTTCTCCCACCACCAAGGTCCGAATGATTGACGCTCTTCACAGACGACAACGGTTCACT
GCCATGACTGGAGATGGTGTCAACGACTCTCCCTCGCTCGCCAAGGCCGATGTTGGTATC
GCCATGGGTATCGCTGGTTCCGACGTTGCCAAGGACGCCTCTGATATTGTTCTGTCAGAC
GACAACTTTGCCTCTATTCTCAACGCCGTGGAAGAGGGACGACGAATGGCCGACAACATC
CAGAAGTTTGTGCTGCATCTGCTTGCTGCCAACGTGGCCTTTTGCGTGTTTGAAATGGTC
GGTCTTGTGTTCATGGACTCGGACGACTTCTCCACCTTCCCCATCTCGCCCATTGAAATC
CTCTGGTGTCTCATGGTCACCTCTGCCCTACCCGCCATGGGTCTGGGTCTCGAGGAAGGT
GCTCCCGATCTCATGGAACTGCCCCCACGTGACCCCAAGAAGGGTGTCTTCTCCTACGAG
CTGCTCATGGACATGATGGTCTACGGCCTCATCATGGCCGGTCTGTGTCTGGGTTCCTTC
GCCATTGTGGTCTATGGAGATGGAGGAGGAGAGCTAGGCTACCTGTGTAACAAGGAGTAC
TCCGAGTCGTGTCACTATGTGTTCCGAGGCCGGTCCGTTGCCTTTGCCGAAATCACCTGG
TTCATGCTCTTCCTGGCGTGGGAGGTGGTCGACATGCGACGGTCCGTCTTCATCAAGCCC
CCCAAGCAGGCCTTCAACGACCTATGGCGCAACCAGCTGCTCTTCTGGTCTGTCATCGGC
GGCTTCTTCACCGTCTTCCCCTGCATTTACATCCCTGTCATCAACGACAAGGTGTTCCTC
CACAAGGGCATTTCCTGGGAGTGGGGCATCTGCTTTGCCGCGCTGGCCATCTTCCTGGTG
CTGGTTGAGCTGTGGAAGTTTGGTAAGCGAGTCTACTTCCGACGCCAGGACGCTGGAGCC
GCCAAGGACGACGTTTTTGACGCCTGGGCCGACATGGAGAAGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E19338g_CDS-001

Protein length: 1055 aa.
Product: Protein with similarity to P-type ATPase sodium pumps, putative

>YALI0E19338g_CDS-001 MTDNISQSPPTAFHTLDVPQVLSHFACDEEQGLSSSQVATQRQQHGPNALDTGDAVSLLQ
VIIGQSCNAMIMVMIIAMCVAFGIRDWISAGVIAGVVAINIVVGVIQQYNAEKTLDSLKN
LSSPSANVIRDGKELVVESEEVVPGDIVTVKVGDTIPADFRLISGVNFETDEALLTGESL
PVVKDPATLDDPVCPVGDRVNMAFSSSVVSKGRAKGIVTSTGMNTEIGTIAKSLQGEKTS
FRKPKDDSFGAKMSAFFGTCGDYIQTFLGTNTGTPLQIRLAKLAVLIFVIAVVMAIVVMA
AQKFDVTREVAIYAVAVAVSMIPASLVVVLTITMAVGTKIMVKRNVIVRKLDSLEALGAV
NDICSDKTGTLTQGKMVARKCWVPSLGTLSVQNITHPYNPTEGSVELRRVDPVADARMTV
KANKKIDQDLSLSPCVSRYSNKSVSIKAINVNESEDSSSDEDPEIISHTHVPASLAPWLY
TATLANIAEVKKDETDGWTASGDPTEIAIQVFTSRLGFGRDTIGYTHIAEHPFDSTIKRM
SAVYTDGEKGQSTVYTKGAVERVLECCSTWINASGTTEDFTPEVDQMIQQQMDAFAKQGL
RVLAFATRPVDLETEDAKDRVKMEQGLTFLGLVGIYDPPRVESAGAVAQCHRAGINVHML
TGDHPGTARAIAEEVGILPRDIADYPESVVSAMVMTAMQFDALTDEQIDALPVLPLVIAR
CSPTTKVRMIDALHRRQRFTAMTGDGVNDSPSLAKADVGIAMGIAGSDVAKDASDIVLSD
DNFASILNAVEEGRRMADNIQKFVLHLLAANVAFCVFEMVGLVFMDSDDFSTFPISPIEI
LWCLMVTSALPAMGLGLEEGAPDLMELPPRDPKKGVFSYELLMDMMVYGLIMAGLCLGSF
AIVVYGDGGGELGYLCNKEYSESCHYVFRGRSVAFAEITWFMLFLAWEVVDMRRSVFIKP
PKQAFNDLWRNQLLFWSVIGGFFTVFPCIYIPVINDKVFLHKGISWEWGICFAALAIFLV
LVELWKFGKRVYFRRQDAGAAKDDVFDAWADMEK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG