YALI0E19272g

Overview

Description weakly similar to uniprot|Q12350 Saccharomyces cerevisiae YPR061c related to dnaJ proteins
Locus type CDS
Locus tag YALI0E19272g

Location

Species Yarrowia lipolytica Positions 2291931..2293093
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1163 (nuc.)
Previous locus YALI0E19250g Next locus YALI0E19294g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E19272g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E19272gYALI0E19272g_mRNA-001YALI0E19272g_CDS-001

Nucleotide sequence

 

>YALI0E19272g
ATGAACCGAATCAAAGCACCTGGTGGGGCGCCCAATATCCACACGCACTTTGTGCTTCTT
CGATCCCGAGCTTTTTCTTCCACACAAAAATGCATGGACTATCCTGCGCACGACAACCCC
TCGCCCTACGAGATCTTTGGCATGGGCCCGCACAATCTCAACCAAAAGGCCCTCAAGCGC
GAGTACTACATTCTGGCGAAAAAATACCATCCCGACTCCAATGGTTCGAGTGAAGAAACC
GCAGATTTGACCAAGGAGATCAAAGATGCGCGGTTCCGAAAGATCTCCAATGCCTACGAG
ATTCTCAAAAACCCCAGTAGACGACACGCCTACGACAGATTTGGCCAGGGCTGGGAGGGA
GCTCGTCCGGGGCCCTACGGTCAAGATGGCGCCACTTCGAACCTGTACAACCAGGCCTCC
ACCGCTACAGCTGGCCATGGACCTCGGTACTCGACCCAATCGGACGGGTTCTGGGGCGCC
TCGGGATGGCAGGACTATGAGGATTTGCGTAACCACAGCAGCAAGGCAAAACAAAACGAG
AACACGACCCTCATCGGCATGGCTTTGGTCGTGGTCGCGGTGGTAGTTACTTACTTGCAG
ATCAAACGAATCATCGACGTGATGGAGGACCAATATTTCCGAGTTAAGGAGCAGAACAAG
AAGCTGGAAGACTCGCTGTTCTGGGCCCGAAACAATTACGGATTTGCACAGGGCAAGGAC
GACCGAGTATCTCGGTTCCTGGTCATGCGACGAAACTCGCTGGCCGAGGAAGGAGACTAC
ATGGAGGCCCAGCTGAGTGAAGACAACTGGCGACGGCGAAAGATTGCCGAAAAGCGAGCC
AAGCAAGCAGAAGCGGCAGCGGCAGCAGCATCCAACGGTGAAGAAGTGCATGGCAAGCTG
GATGCTACTCCCGAGCCTCCGGTCCGTCCCCCTCCCACTGCTCTCGAGGTGGTGAATGCC
TTTTCCAAGTCTGAGCTCATTTCCAAGGCCGTTTCTCTGACCACCAAGGATCAGGTGGTC
TCCACAACGTCGGCTGTTTTTACAGATTCACTTCTGACGTCCATCCAGGGTGTGGATAAA
GAGTAGATGGTGGACATGGAGGCGAGAACGGAAAGCCATTTTGACACGATATAATGAATG
CATATTTATTTCTGACTAAGATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E19272g_CDS-001

Protein length: 362 aa.
Product: Conserved hypothetical protein

>YALI0E19272g_CDS-001 MNRIKAPGGAPNIHTHFVLLRSRAFSSTQKCMDYPAHDNPSPYEIFGMGPHNLNQKALKR
EYYILAKKYHPDSNGSSEETADLTKEIKDARFRKISNAYEILKNPSRRHAYDRFGQGWEG
ARPGPYGQDGATSNLYNQASTATAGHGPRYSTQSDGFWGASGWQDYEDLRNHSSKAKQNE
NTTLIGMALVVVAVVVTYLQIKRIIDVMEDQYFRVKEQNKKLEDSLFWARNNYGFAQGKD
DRVSRFLVMRRNSLAEEGDYMEAQLSEDNWRRRKIAEKRAKQAEAAAAAASNGEEVHGKL
DATPEPPVRPPPTALEVVNAFSKSELISKAVSLTTKDQVVSTTSAVFTDSLLTSIQGVDK
E*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG