YALI0E18986g

Overview

Description highly similar to uniprot|P0CG63 Saccharomyces cerevisiae YLL039c UBI4 ubiquitin
Locus type CDS
Locus tag YALI0E18986g

Location

Species Yarrowia lipolytica Positions 2264336..2265889
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1554 (nuc.)
Previous locus YALI0E18964g Next locus YALI0E19008g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18986g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18986gYALI0E18986g_mRNA-001YALI0E18986g_CDS-001

Nucleotide sequence

 

>YALI0E18986g
ATGCAGATTTTCGTCAAGACGCTGACCGGTAAGACCATCACGCTTGAGGTGAGTACAACG
ATGGCTAGTTTAGGGGATTTCCGCCGCCCTGTGACGTAGACAGGGTGGCGTCCAAACACA
AACACACACAAACATTACTAACAACAGGTCGAGTCCTCCGACACCATCGACAACGTCAAG
TCCAAGATTCAGGACAAGGAGGGAATTCCTCCGGACCAGCAGCGACTGATTTTTGCTGGT
AAGCAGCTCGAGGATGGTCGAACCCTGTCTGACTACAACATTCAGAAGGAGTCCACTCTC
CATCTCGTTCTCCGACTCCGAGGTGGTATGCAGATTTTCGTCAAGACTCTGACTGGAAAG
ACCATCACTCTCGAGGTTGAGTCTTCTGACACTATTGATAATGTCAAGTCCAAGATTCAG
GACAAGGAGGGAATTCCCCCGGACCAGCAGCGACTGATTTTTGCTGGTAAGCAGCTCGAG
GATGGTCGAACTCTTTCCGACTACAACATTCAGAAGGAGTCCACTCTCCATCTCGTTCTC
CGACTCCGAGGTGGTATGCAGATTTTCGTCAAGACTCTGACTGGAAAGACCATCACTCTC
GAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGA
ATTCCCCCGGACCAGCAGCGACTGATTTTCGCTGGTAAGCAGCTCGAGGATGGTCGAACT
CTTTCCGACTACAACATTCAGAAGGAGTCCACTCTCCATCTCGTTCTCCGACTCCGAGGT
GGTATGCAGATTTTCGTCAAGACTCTGACTGGAAAGACCATCACTCTCGAGGTTGAGTCT
TCCGACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCGGAC
CAGCAGCGACTGATTTTCGCTGGTAAGCAGCTCGAGGATGGTCGAACTCTTTCCGACTAC
AACATTCAGAAGGAGTCCACTCTCCATCTCGTTCTCCGACTCCGAGGTGGTATGCAGATT
TTCGTCAAGACTCTGACTGGAAAGACCATCACTCTCGAGGTTGAGTCTTCCGACACCATC
GACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGAATTCCCCCGGACCAGCAGCGACTG
ATTTTTGCTGGTAAGCAGCTCGAGGATGGCCGAACTCTTTCTGACTACAACATTCAGAAG
GAGTCCACTCTCCATCTCGTTCTCCGACTTCGAGGTGGTATGCAGATTTTCGTCAAGACT
CTGACTGGAAAGACCATCACTCTCGAGGTTGAATCTTCTGACACTATTGATAATGTCAAG
TCCAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAGCAGCGACTGATTTTTGCTGGT
AAGCAGCTTGAGGATGGCCGAACTCTTTCCGACTACAACATCCAGAAGGAGTCCACTCTC
CATCTCGTTCTTCGACTCCGAGGTGGCCAGTGAGTTATATAATTAGCTGTAGCTTCTTAA
TATTATATTCTCTGGAGAATATTCGAGTACATACGATCGTGGCACTCGTACTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18986g_CDS-001

Protein length: 458 aa.
Product: Ubiquitin, putative

>YALI0E18986g_CDS-001 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG