YALI0E19008g

Overview

Description similar to uniprot|P23287 Saccharomyces cerevisiae YLR433C (ohnolog of YML057W) CNA1 calcineurin B, catalytic subunit
Locus type CDS
Locus tag YALI0E19008g

Location

Species Yarrowia lipolytica Positions 2266894..2268587
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1694 (nuc.)
Previous locus YALI0E18986g Next locus YALI0E19030g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E19008g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E19008gYALI0E19008g_mRNA-001YALI0E19008g_CDS-001

Nucleotide sequence

 

>YALI0E19008g
ATGGACAATACACAGCTCTCCAACGCGGTCAAGGCGTTCCAGAACCGCAAGCCATTGCCG
AAAATCGACTTCACCCAGCACACCATGGAGGACGGATCGGTGGTGTCGACGGTCGACAGA
CCCATCAAGTCGGTGCCTGCGCCCGCCACTAACAAGCCGTCCGACGACGACGTGTTCGAC
CGAGCCACCGGGAAACCCAACTTGGAGTTTCTCAAGGACCACTTTTACCGAGAAGGCCGA
CTGTCCAACGAGCAGGCGATTCGCATCGTAGAGGCCGGATCGCGCATCCTGGAGCAAGAA
CCGACGCTGCTGGAGGTGGACGCCCCCATCACCATCTGTGGAGACGTGCATGGCCAGTTT
TACGATCTGCTCAAGTTGTTTGAGGTTGGAGGAACCCCCGGACCCAGTACACGGTACCTG
TTCCTGGGCGACTATGTGGATCGAGGCTACTTTTCCGTCGAGTGCGTGCTCTACCTGTGG
TCGCTGAAAATCCACTACCCGGACTCCATCTACCTGCTGCGAGGCAACCACGAGTGCCGT
CATCTGACGGAATACTTCACATTCAAGCTGGAATGTGTCCACAAGTACGGCGTCGATCTG
TACGAGGCGTGTCTGGCCTCCTTCTGTACCCTGCCTCTGGCCGCCATTATGAACAGACAG
TTTCTGTGTGTCCACGGAGGCCTGTCTCCTGAATTGCATACCCTGGACGATCTGCGGCGA
ATCGACCGGTTCCGAGAGCCTCCCACCCACGGCATCATGTGTGATTTGCTGTGGGCCGAT
CCCTGCGAGGACTTTGGAGCCGAAAAGGGCAACGAACACTTTGTCCACAACTCCGTGCGA
GGATGCTCCTTCTTCTACTCCTATCACGCCGCTTGTGCCTTCCTGGAGGCCAACGGACTG
CTGTCCATCATTCGAGCTCACGAGGCCCAGGATGCCGGCTACAGAATGTACAGAAAAACC
AAGAGCACTGGTTTCCCCTCGGTCATGACCATCTTCTCGGCACCCAACTATCTGGATGCA
TACAATAACAAGGCTGCGGTTCTTAAGTACGAGAACAACGTCATGAACATTCGGCAGTTC
AACTCATCTCCCCATCCCTACTGGCTGCCCAACTTCATGAATGTGTTCACCTGGTCCATG
CCCTTTGTGGGTGAGAAGATCACCGAAATGCTCATTACCATGCTCAACATTTGCACAAAG
GAGGAGCTTGAAGATGACGACAGCGTTAGCGGGATCAGTGAAGCTACTGAGCCCAAACCC
GCTGCTTCTGTCGCCACCGGTGACTCTGATGCTCCCAGTGCCATCTCGTTCGACCAGCGA
AGGGCTCTCAGAAACAAGATTCTGGCCATTGGGCGAGTGTCACGTCTATTCAACGTTCTG
CGACAGGAGTCCGAGTCTGTTTCAGAGCTCAAGGCTGTGTCTGGAGGCAAGCTTCCTCAG
GGAACCCTTATGCTCGGTGGCCAGGGTATTCGAGACGCTATCACTTCGTTTGAGGAGGCT
AGAAGCGCGGATCTGAGCAACGAGCGCCTGCCTCCTACTAGTGAGGAGCAGGCCAAGGAA
AAGCAGCAGCAGCAGGAGGGCTTCAAGAAGGCCATGGGCGAGCATGATGAAAAGATCCAG
CGATTGGCCCGACGGCTGAGCAGGGGTTGAGAATTTATATAGTATAAAGCGACGTTGCAC
AGTAGTACATACTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E19008g_CDS-001

Protein length: 550 aa.
Product: Calcineurin A, putative

>YALI0E19008g_CDS-001 MDNTQLSNAVKAFQNRKPLPKIDFTQHTMEDGSVVSTVDRPIKSVPAPATNKPSDDDVFD
RATGKPNLEFLKDHFYREGRLSNEQAIRIVEAGSRILEQEPTLLEVDAPITICGDVHGQF
YDLLKLFEVGGTPGPSTRYLFLGDYVDRGYFSVECVLYLWSLKIHYPDSIYLLRGNHECR
HLTEYFTFKLECVHKYGVDLYEACLASFCTLPLAAIMNRQFLCVHGGLSPELHTLDDLRR
IDRFREPPTHGIMCDLLWADPCEDFGAEKGNEHFVHNSVRGCSFFYSYHAACAFLEANGL
LSIIRAHEAQDAGYRMYRKTKSTGFPSVMTIFSAPNYLDAYNNKAAVLKYENNVMNIRQF
NSSPHPYWLPNFMNVFTWSMPFVGEKITEMLITMLNICTKEELEDDDSVSGISEATEPKP
AASVATGDSDAPSAISFDQRRALRNKILAIGRVSRLFNVLRQESESVSELKAVSGGKLPQ
GTLMLGGQGIRDAITSFEEARSADLSNERLPPTSEEQAKEKQQQQEGFKKAMGEHDEKIQ
RLARRLSRG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG